Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 9e-15 >seq2 Length=7068955 Score = 95.1 bits (104), Expect = 9e-15 Identities = 244/362 (67%), Gaps = 10/362 (3%) Strand=Plus/Minus Query 101860 ATCACAGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTC 101919 || || ||||||||| || || | || |||||||||| |||| |||| | ||| Sbjct 5086388 ATAACTGACATAAAACTGCGCAAACATGTGGCAAGGCGGCAGTGCCATCTTAGATAGGTC 5086329 Query 101920 TGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATC 101979 | |||||||| |||| | | |||| || || ||| || ||| | || | || Sbjct 5086328 CGCTACATTCCACGCACTGAGAATGATCCGCCTGTC-GTATGGATTGGTCTTGAGTTTTC 5086270 Query 101980 A-ATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACAC-CTTTA 102037 | || || ||| | ||||| ||||||| || | || || | || | || Sbjct 5086269 GCACCACCTCTTTGATCTGGTCCACTCCTTTGCCCGTGTAGTCT-GTATGGCAGTCCTTG 5086211 Query 102038 TATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT 102097 || |||||||||||||| | ||| |||||||| || ||||| || ||||||||||| || Sbjct 5086210 TACTCTGCTCCGAAATGGCGCCATTGAAATCCGTAGACAGGGCCGAGATCTCCTTCCTCG 5086151 Query 102098 CTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGC 102157 | |||| || || | || || | ||| || || || ||| | ||||| ||||| Sbjct 5086150 CGGTCAACGAATCCCAACTTGTCGAGGAATTCTCGCGAGCCGTTCCCGTCCCAGATGTGG 5086091 Query 102158 ACGCCAGCTGCTGATAG-CTCTTTGCTGTCAGTAGATCCTCTGATA--AACCACAACAGT 102214 | ||| ||| |||| || ||| | |||| || | | |||||| ||||||| ||| Sbjct 5086090 ATGCCTGCTTCTGAGAGAGGCTTCGATGTC-GTGCAGC--CTGATACGAACCACAGCAGC 5086034 Query 102215 TC 102216 || Sbjct 5086033 TC 5086032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249980438527