Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq7 143 3e-29
seq1 140 3e-28
seq6 114 1e-20
seq4 107 2e-18
seq5 100 3e-16
>seq7
Length=4110827
Score = 143 bits (158), Expect = 3e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || || || ||||| |||||||| | || ||||| ||| |
Sbjct 1063579 ATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 1063520
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | |||| || || | ||||| |||||||||||| ||||||||
Sbjct 1063519 GACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1063460
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| || || || |||| |||||||| ||||||||||
Sbjct 1063459 CAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAAC 1063400
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| | || ||||| || ||
Sbjct 1063399 ATCCAGAAGGAGTCGACCCTGCACCTGGT 1063371
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| |||||||| || || || ||||| || || || | || || || | |
Sbjct 1063123 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 1063064
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || || | ||||| |||||||| || |||||||
Sbjct 1063063 GACACGATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1063005
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || || | ||||||||| ||| |||| |||| ||| || |||| |||||||||
Sbjct 1063004 GCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAA 1062945
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| |||| |||| | ||| || | || | ||||||
Sbjct 1062944 CATCCAGAAGGAGAGCACGTTGCACTTGGTGCTGAGACTGCGTGGCGGC 1062896
Score = 134 bits (148), Expect = 1e-26
Identities = 158/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| |||||||| || || || ||||| || ||||| | || || ||| | | |
Sbjct 1063351 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAGC 1063292
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || || | ||||| || || ||||| | |||||
Sbjct 1063291 GACACGATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCA 1063233
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| |||||||| |||||||| |||| ||||| ||| ||||||||
Sbjct 1063232 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAA 1063173
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| | ||||| ||||| |||
Sbjct 1063172 CATCCAGAAGGAATCGACGCTCCATCTCGTG 1063142
>seq1
Length=8230860
Score = 140 bits (154), Expect = 3e-28
Identities = 342/511 (67%), Gaps = 12/511 (2%)
Strand=Plus/Minus
Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACC--CTCATCGACACGTACGTGCGCTCTT 116927
|||||||| | |||||||||||||| | || ||||| ||||| || ||
Sbjct 2004789 ATGGAGAATATCCACTCGGAAATGTA--CAGCCTTCTCATTGACACCTATGTAAAGGACC 2004732
Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987
| | |||||| | |||| |||||||||| || || || ||| | |||| |
Sbjct 2004731 CCAAAGAGAAGACATATCTGTTCGACGCCATCGACACAATCCCTTGCATTCGCAAGAAAG 2004672
Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047
| || ||||| ||||| ||||| | | || |||| | ||| | | | || || ||||
Sbjct 2004671 CAGACTGGGCTCTGCGATGGATATCAGACAAAGAGTCGAGCTTTGCCCAACGACTAGTGG 2004612
Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107
| ||||| |||||||| ||| ||||||| || || || || |||| || ||||| |
Sbjct 2004611 CTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCATCCATCTTCTGGCTGA 2004552
Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
||| || || ||||||||||| || ||| ||||||||||||||| | |||||||
Sbjct 2004551 AGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGG 2004492
Query 117168 GTCTGCATTGCGACTTTGCCTG---TTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCG 117224
| |||| |||||||| || |||| || ||| ||| || ||| ||| |
Sbjct 2004491 GCATGCACACGGACTTTGCGTGCCTTTTGATG--CAA-CATCTGCAGCACAAGCCGGACC 2004435
Query 117225 CGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284
| | | || | || | ||||| || ||| ||||| || ||||||||||
Sbjct 2004434 CACAACTCATCGAAAACATTATAACCGAAGCCGTCAGGATCGAAAAGGAATTCCTCACCG 2004375
Query 117285 AAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAG 117343
| || || || || ||||| || | || | |||| | |||| || ||||| |||
Sbjct 2004374 ATGCCCTCCCCGTCGCACTGCTCGGCATGAACT-CGAAGCTCATGTGTCAGTACATTGAG 2004316
Query 117344 TTCGTCGCCGACAGGCTGCTGCTCGAGCTGG 117374
|| || || ||| | ||||| || | ||||
Sbjct 2004315 TTTGTTGCTGACCGTCTGCTCCTTGCCCTGG 2004285
Score = 82.4 bits (90), Expect = 8e-11
Identities = 133/191 (70%), Gaps = 3/191 (2%)
Strand=Plus/Minus
Query 116669 TTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG---CGCTTG 116725
|||||||| | || || || || || ||||| ||| ||||||| | || |||
Sbjct 2005043 TTCTGGACGGCAGAAGAAGTTGATCTCTCCAAAGACCTTCACGACTGGCACAACCGTTTG 2004984
Query 116726 AACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGC 116785
||| | |||| || | |||||| ||||| || ||||| || || || ||||||
Sbjct 2004983 AACAATGACGAACGTTACTTCATCTCTCACGTCCTCGCCTTCTTTGCTGCATCGGACGGC 2004924
Query 116786 ATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGG 116845
|| ||||||||||| || | ||||| ||| | || || || ||| | || || ||
Sbjct 2004923 ATTGTCAACGAGAACCTTCTAGAGCGCTTCAGTGCCGAAGTACAAGTGCCGGAAGCCCGT 2004864
Query 116846 TGCTTCTACGG 116856
|||||||||||
Sbjct 2004863 TGCTTCTACGG 2004853
>seq6
Length=4175021
Score = 114 bits (126), Expect = 1e-20
Identities = 136/182 (75%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGT 40757
||||| || || ||||||||||| ||||||||| | || ||||| | |||||| |
Sbjct 1382970 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 1383029
Query 40758 GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| || |||||||| | |||||||| ||| |
Sbjct 1383030 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGATT 1383088
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| || || || || | || || || | ||||||||||||||||||
Sbjct 1383089 GATCTTCGCCGGCAAGCAACTTGAAGATGGCCGAACTCTGAGCGACTACAACATCCAGAA 1383148
Query 40878 GG 40879
||
Sbjct 1383149 GG 1383150
>seq4
Length=6030834
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || ||||| ||| ||||||||||||| || |||| ||| ||||| || || ||
Sbjct 3720578 GACAAGGAAGGCATTCCCCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 3720637
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| ||||| ||| ||||||||||||||||||||| | || || || || || |||
Sbjct 3720638 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTCCACCTGGTCTTG 3720697
Query 40903 CG 40904
||
Sbjct 3720698 CG 3720699
>seq5
Length=4609732
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||| | || || || || | ||| || ||||| | || || || | | |
Sbjct 1365202 ATGCAGATTTTCATGAAGACACTTACTGTCAAGACGATCACGCTGGAGGTTGAGTCGAGC 1365143
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | ||||| || ||| ||||| || || ||| | | ||||||
Sbjct 1365142 GACACAATCAACAACATCAAGAGCAAGATTTAGGACAAGGAAGGGATCACATCCGACCAG 1365083
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| |||||||| |||||||| |||| |||||| ||||||||||
Sbjct 1365082 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCAGGTCCGACTACAAC 1365023
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||| | ||||| ||||| ||| ||| | | ||||||
Sbjct 1365022 ATCCAGAAGGAATCGACGCTCCATCTCGTGCCCCGCCTCCGCGGCGGC 1364975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515217416053520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |