Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq2 428 4e-115
seq1 178 1e-39
seq7 123 2e-23
seq6 93.3 4e-14
seq5 86.0 6e-12
>seq2
Length=7068955
Score = 428 bits (474), Expect = 4e-115
Identities = 1238/1890 (66%), Gaps = 27/1890 (1%)
Strand=Plus/Plus
Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162
||||| || || || || || || | | || ||||| | ||||| || || ||||||
Sbjct 2066283 TCTTGGTCGACAGTGAATTGAATAGGTTGTGTGGCCGCCATCGTGCGCAGGTAGTACATG 2066342
Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222
|| ||||| |||||||| ||||| | ||| || || ||| | || || |
Sbjct 2066343 CCGGTCTTGAGACCCATTTTCCAGCCTGCAAAGTGCATGCTCGTGATCTTGCCCATGGTT 2066402
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
|| | || || | |||| ||||| ||| || || || || || || || ||
Sbjct 2066403 GGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGGTCAATGAAGGCACCACGGTCCGCT 2066462
Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342
||||| | | | || ||| |||||||||||||||||||| || ||||
Sbjct 2066463 GCCATTTGCAGGACGGTCCGCTGGCTGATTTCCCATACGGTCTTGTATAGAGCTTTGATG 2066522
Query 22343 TCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT 22401
|| || | || | | || | |||| || ||| | | |||||| ||| ||
Sbjct 2066523 TCCGCAGGAA-CGTTGGGGATGTTTTGGATCGAGCCGCCTTCGGCGATGATCCGATTCTT 2066581
Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461
|| | ||| ||| | || | | || | ||| || | ||| | || || ||
Sbjct 2066582 CATATTGTCGGACCATAGGCCCAAGTCGACGAGATCCTTCAGCAGCCAGGGATTGACAAC 2066641
Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521
|| ||||| |||| | ||| ||||| ||| || || |||||| |||||||||| |
Sbjct 2066642 CTGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCA 2066701
Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581
||| ||||| || || || |||| ||||| || || ||||| || || | || || ||
Sbjct 2066702 TTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGA 2066761
Query 22582 GTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGA--GCATCGACCAGTCCCACAGATCG 22639
||| | | || || || | ||| | || | || || ||| ||||||| ||
Sbjct 2066762 GTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTC--CCAATCCCACAAGTCT 2066819
Query 22640 GACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGC 22697
|| || || ||||| |||||| |||||||| | | ||| ||||| | |||||||
Sbjct 2066820 GAGGGAGTGACATT---CCACATGTCGTATTGAAGAATGCCTTGCGACACT--GGGCTGC 2066874
Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757
||||||| ||||| || | || | | || ||||| || || | ||
Sbjct 2066875 CTTCGTATGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAG 2066934
Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACG 22817
| | || || ||||||||||||| | ||||||| ||| || ||| | |
Sbjct 2066935 CATGGTAGATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAG 2066994
Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877
| | ||||| | | ||| ||||| || | ||| ||||| || | ||||| |||||||
Sbjct 2066995 GAAGACGCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGT 2067054
Query 22878 TTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGT 22937
| | || | || || || || | ||| || | || |||||| | |||
Sbjct 2067055 GTCGGAAGTTGCTCTTCTTCGCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGT 2067114
Query 22938 TCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-C 22996
| | ||| | ||||||| | || | | ||||| || | || |
Sbjct 2067115 TTAGGTTGCGAGTCACAACCTGAGTGACCTCATGAAGACGACCGAAGTCATATTCACCTC 2067174
Query 22997 GA--TTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGT 23054
|| ||| | || || | || || | ||||| |||||||| || || ||||| |
Sbjct 2067175 GAGCTTGGTCGACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCAT 2067234
Query 23055 CTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAAT 23114
| | |||||| || ||||| || || || |||||| | || || ||||| |
Sbjct 2067235 CGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGT 2067294
Query 23115 TGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCT 23174
| |||||||||| |||| |||||| | |||||||||||||| || ||||| || || |
Sbjct 2067295 TCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTT 2067354
Query 23175 CGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC- 23233
|| ||| | ||||| ||| || ||| | ||||||| | ||| ||| || |
Sbjct 2067355 CGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACA-GTCTGGCGACCA 2067413
Query 23234 CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCC 23293
| ||| || | ||| || | | ||| | |||| || ||| |||| || ||||||
Sbjct 2067414 CGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGGCA 2067473
Query 23294 AGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCT 23352
||||| || | | ||| ||||| | |||| |||| | || || || || |||
Sbjct 2067474 AGGCCAGGTGCCT-CATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTC 2067532
Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412
||| || | || || |||| | |||||||||| ||||| || | ||||| || ||
Sbjct 2067533 CATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTT 2067592
Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472
|||| ||||||| ||| | ||||||||| |||||||| || ||||| |||||||||||
Sbjct 2067593 GCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTA 2067652
Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532
| |||||| || || || | ||||||||| |||||||||||||| || || || || ||
Sbjct 2067653 GATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGTATTATT 2067712
Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592
| | || | ||||| || | || |||||||| | ||| ||| || | ||
Sbjct 2067713 GAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTGGTGCCTGCAATGTAGGA 2067772
Query 23593 ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652
||| | || |||| | || | | || ||| || ||||| | | || || |||||
Sbjct 2067773 TCCTGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCCAGCTGTCTTGGAGATCAT 2067832
Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712
|| || || || ||||| || || |||||||||||||| ||||| | | | |||
Sbjct 2067833 GGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAA 2067892
Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772
|||||| || |||| ||| | || || || |||| ||| || || || |||||
Sbjct 2067893 GAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTG 2067952
Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832
|||||| | | ||||| ||||||||||| |||||||| ||||| || || |
Sbjct 2067953 GGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCT 2068012
Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC--TCTCGACCGTGA-CGCC 23889
||| ||||| | || || ||||| | ||||| ||| || | || | | ||| |||
Sbjct 2068013 GTGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCC 2068072
Query 23890 GTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAA 23949
||| |||| ||| ||||| | | || ||| || || |||||||| | ||||| ||
Sbjct 2068073 ---AATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAA 2068129
Query 23950 GTCACGATCGTGCACTATGGCCGAATTCAA 23979
||| || |||| || || || || || ||
Sbjct 2068130 GTCTCGGTCGTAGACAATTGCAGAGTTGAA 2068159
>seq1
Length=8230860
Score = 178 bits (196), Expect = 1e-39
Identities = 345/502 (69%), Gaps = 8/502 (2%)
Strand=Plus/Minus
Query 57792 TTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTAC 57851
|||||||| || || || | || || |||||||| || ||||| || || ||
Sbjct 2004801 TTTCAAGTCATGATGGAGAATATCCACTCGGAAATGTACAGCCTTCTCATTGACACCTAT 2004742
Query 57852 GTGAAGGACAACGACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGA 57909
|| |||||| | | ||||| || || |||||| |||| ||||| ||||| || ||
Sbjct 2004741 GTAAAGGACCCCAAAGAGAAGACATAT-CTGTTCGACGCCATCGACACAATCCCTTGCAT 2004683
Query 57910 TCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCG 57969
|||| ||||| ||||| ||| | | ||||||| | | | | | || |||
Sbjct 2004682 TCGC-AAGAAAGCAGACTGGGCTCTGCGATGGATATCAGACAAAGAGTCGAGCTTTGCCC 2004624
Query 57970 AGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAA 58029
| | ||| | || ||||| ||||||||||| || ||||| || || |||||| | |
Sbjct 2004623 AACGACTAGTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCATCCA 2004564
Query 58030 TATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATAT 58089
| || ||| |||||| || |||||||||||||| || || ||||||| | || |
Sbjct 2004563 TCTTCTGGCTGAAGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCT 2004504
Query 58090 CGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCA--A 58147
| || |||||||| | || || || ||||||||||| | | | |||| || |
Sbjct 2004503 CTCGTGACGAGGGCATGCACACGGACTTTGCGTGCCT--TTTGATGCAACATCTGCAGCA 2004446
Query 58148 TAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGA 58207
|| ||| | | | |||| ||||||| ||||| || ||| ||||||||| ||
Sbjct 2004445 CAAGCCGGACCCACAACTCATCGAAAACATTATAACCGAAGCCGTCAGGATCGAAAAGGA 2004386
Query 58208 GTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAA 58267
|| ||||||| ||||| || || || ||||||| |||||| | | |||| |
Sbjct 2004385 ATTCCTCACCGATGCCCTCCCCGTCGCACTGCTCGGCATGAACTCGAAGCTCATGTGTCA 2004326
Query 58268 GTACATTGAGTTTGTTGCCGAC 58289
|||||||||||||||||| |||
Sbjct 2004325 GTACATTGAGTTTGTTGCTGAC 2004304
>seq7
Length=4110827
Score = 123 bits (136), Expect = 2e-23
Identities = 169/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||||||||| || || ||||| |||||||| | || |||||| ||
Sbjct 1063352 CATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAG 1063293
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGA 31308
||||| |||| | ||||| ||| || | | |||||||||||| | ||||||||
Sbjct 1063292 CGACACGATCGACAACGTCAA---GAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGA 1063236
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||||||||| || || || || ||||| ||| |||| ||| || | || ||
Sbjct 1063235 CCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTA 1063176
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || |||||||| || ||||| || || | || | |||||||
Sbjct 1063175 CAACATCCAGAAGGAATCGACGCTCCATCTCGTGCTCCGGCTCCGCGGCGGTA 1063123
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||||||||| || || ||||| ||||| || | || || || ||
Sbjct 1063123 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 1063064
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||||||||| ||| | || || ||||||
Sbjct 1063063 GACACGATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 1063004
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| |||||||| ||| |||| | ||||| || |||
Sbjct 1063003 CAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAAC 1062944
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || || || || | || |||| || |||||| | |||||
Sbjct 1062943 ATCCAGAAGGAGAGCACGTTGCACTTGGTGCTGAGACTGCGTGGCGG 1062897
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| ||||| || || ||||| || ||||| | || || || |
Sbjct 1063580 CATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAG 1063521
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| |||| | |||||| | || ||||||||| ||| | || || |||||
Sbjct 1063520 CGACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 1063461
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || ||||| ||||| || | |||||| || || ||| || ||
Sbjct 1063460 GCAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAA 1063401
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || ||||| || || ||||| ||
Sbjct 1063400 CATCCAGAAGGAGTCGACCCTGCACCTGGTCCT 1063368
>seq6
Length=4175021
Score = 93.3 bits (102), Expect = 4e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || || ||||| || |||||| | || || || ||||||||| ||
Sbjct 1382970 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 1383029
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || |||||||||||| | ||||||||||||||||| |
Sbjct 1383030 GACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGATTG 1383089
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| ||||| ||||| || | ||||| ||| ||||||| || ||||| || ||
Sbjct 1383090 ATCTTCGCCGGCAAGCAACTTGAAGATGGCCGAACTCTGAGCGACTACAACATCCAGAA 1383148
>seq5
Length=4609732
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||| | ||||| || || | ||| |||||||| | || ||||| ||
Sbjct 1365203 CATGCAGATTTTCATGAAGACACTTACTGTCAAGACGATCACGCTGGAGGTTGAGTCGAG 1365144
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| || | | |||| | || |||||||||||| | | |||||||
Sbjct 1365143 CGACACAATCAACAACATCAAGAGCAAGATTTAGGACAAGGAAGGGATCACATCCGACCA 1365084
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || || ||||| ||| |||| ||| || | | ||| || ||
Sbjct 1365083 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCAGGTCCGACTACAA 1365024
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401
||| || || |||||||| || ||||| ||
Sbjct 1365023 CATCCAGAAGGAATCGACGCTCCATCTCGT 1364994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764856533840
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