Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 105 1e-17 >seq2 Length=7068955 Score = 105 bits (116), Expect = 1e-17 Identities = 175/250 (70%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 |||||||| ||||||||||| || || ||| || || ||||| || ||||| ||| Sbjct 2067810 CCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATG 2067869 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGA-CTGTTCCACA 94910 || || |||| | | | | | ||| || ||||| ||||| ||| ||| ||||| Sbjct 2067870 CTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGT-TGAGGGGTTCCGGC 2067928 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || || || ||||| ||||| |||||||| | | | |||||||||| || || || Sbjct 2067929 GTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTC 2067988 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 ||| | || || || | |||||| || || ||||||||||||| ||||| || Sbjct 2067989 GATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACACGCATAAGCATGTGTTG 2068048 Query 95031 AGGGCGCTCA 95040 || || ||| Sbjct 2068049 GGGCCGTTCA 2068058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580487904535