Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2 235 7e-57
seq1 100 4e-16
>seq2
Length=7068955
Score = 235 bits (260), Expect = 7e-57
Identities = 750/1148 (65%), Gaps = 30/1148 (3%)
Strand=Plus/Plus
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008
|| |||||||| ||||| || ||||||| | | ||| |||| | ||||||||||||
Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266
Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068
||||| | ||| || || || || | || || |||||| | || || || |||
Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326
Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128
|| || || || | || || |||||||| |||| | || | || || | ||| | |
Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 2067385
Query 63129 ACTC-GAGCCTTTATTATA----GATTT-GTATCTCCTT----TCTCTTTCGTATAGAGT 63178
|| ||||||||| | || | |||||| | ||| ||||||||||
Sbjct 2067386 TTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAG- 2067444
Query 63179 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACA 63238
|||| ||||||||| || | || | | | | | ||| |||| |||||
Sbjct 2067445 -------CGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACA 2067496
Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298
| | | ||| ||| || | || || |||| ||| || | |||||| |||| |
Sbjct 2067497 GAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAT 2067556
Query 63299 AGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357
|| || || || || | || |||| || || || || |||||| | || | |
Sbjct 2067557 GGCGTAGAACAAG-TCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCA 2067615
Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417
|| | | | || | ||||| || || | ||| ||||| | | | || || || |
Sbjct 2067616 AAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCT 2067675
Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477
| || || |||||||| | ||| | ||| || ||||| | || | | ||| || ||||
Sbjct 2067676 TATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAA 2067735
Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACT 63535
||||| || | |||||||| || | || ||| ||| |||||||||| | |
Sbjct 2067736 GCCCGTTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGG 2067795
Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595
||||| |||| || || || || | || ||||| | || || || | |||||
Sbjct 2067796 CATTGA--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTC 2067853
Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
||| || || || ||||| || || |||||| || | |||||| |||| ||| |
Sbjct 2067854 ATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGG 2067913
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
||| ||||| || || || | ||| || |||||||| ||||| || || | || |
Sbjct 2067914 TTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACAT 2067973
Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACAC 63774
|||||||||||||| || || || ||||| | || ||||| || ||||| ||||
Sbjct 2067974 GAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACAC 2068032
Query 63775 GCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATT 63834
|||| | |||||| || || | |||| ||| || ||| || || | || ||| |||
Sbjct 2068033 GCATAAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATC 2068092
Query 63835 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63894
| |||| || || ||||||||||| | ||| |||||||| ||||| | ||| | |
Sbjct 2068093 TCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAG 2068152
Query 63895 AATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT-GAAATAATCGGA 63953
| |||| || ||| | | | | || | || | | | | ||| || || |||||
Sbjct 2068153 AGTTGAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGGG 2068211
Query 63954 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 64013
|| ||||| |||||| ||||| ||||||| | | | ||| | ||| ||||
Sbjct 2068212 GAGGGTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAAT 2068271
Query 64014 AGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAA 64073
| || || || | ||||| || ||||| | || || | || || || | |||||
Sbjct 2068272 TGCTTCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATAG 2068331
Query 64074 TCCGGATG 64081
|| |||||
Sbjct 2068332 TCGGGATG 2068339
>seq1
Length=8230860
Score = 100 bits (110), Expect = 4e-16
Identities = 222/330 (67%), Gaps = 6/330 (2%)
Strand=Plus/Plus
Query 33575 CATCAAA---CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGA 33631
||||||| || || || || ||||| |||||||| | | || | ||||| ||
Sbjct 2004460 CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGA 2004519
Query 33632 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC 33691
|| ||||| |||||||| || || | || ||||| || ||||| || || |||||
Sbjct 2004520 GAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCC 2004579
Query 33692 GGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGC 33750
|| |||||||| ||||| || || || || || | |||| | || | | || | |
Sbjct 2004580 AGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTC 2004639
Query 33751 T--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 33808
| ||| |||||| ||||||| || || ||||| | ||||| || || ||
Sbjct 2004640 TTTGTCTGATATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTC 2004699
Query 33809 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 33868
||||| | || ||||| | || || || || || ||||| || || || | |||
Sbjct 2004700 GATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAG 2004759
Query 33869 ACTATACATTTCCGAATGAATGTTTTCAAT 33898
|| ||||||||||| || || || || ||
Sbjct 2004760 GCTGTACATTTCCGAGTGGATATTCTCCAT 2004789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629815419256560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |