Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 226 4e-54
seq1 109 7e-19
>seq2
Length=7068955
Score = 226 bits (250), Expect = 4e-54
Identities = 747/1144 (65%), Gaps = 22/1144 (2%)
Strand=Plus/Plus
Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 65801
|| |||||||| || || || ||||||| | | ||| |||| | ||||||||||||
Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266
Query 65802 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 65861
||||| | |||||| || || || | || || |||||| | || || || |||
Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326
Query 65862 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 65921
|| || || || | || || |||||||| |||| | || | || || | ||| | |
Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 2067385
Query 65922 ACTC-GAGCCTTTATTATAGATTTGT-ATCTCTTTTCTCTTTCGTATAGT----GTATAC 65975
|| ||||||||| || | | | | | ||| ||| ||| |||||
Sbjct 2067386 TTTCTGAGCCTTTAC---AGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAG 2067442
Query 65976 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 66035
| |||| ||||||||| || | || | | | | ||||| |||| ||||| |
Sbjct 2067443 AG-CGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAG 2067500
Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 66095
| | ||| ||| || | || || |||| ||| || | |||||| |||| | ||
Sbjct 2067501 AGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCG 2067560
Query 66096 ATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 66155
|| || || | | |||| || || || || |||||| | || | | ||
Sbjct 2067561 TAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAG 2067620
Query 66156 GCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 66215
| | | || ||||| || || | ||| ||||| | | | || || || || ||
Sbjct 2067621 TCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTG 2067680
Query 66216 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 66275
|| |||||||| | ||| | ||| || ||||| | || | | ||| || |||| ||
Sbjct 2067681 CCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCG 2067740
Query 66276 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTG 66333
||||| || |||||||| || | || ||| ||| | |||||||| | | ||||
Sbjct 2067741 TTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTG 2067800
Query 66334 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 66393
| |||| || || || || | || ||||| | || || || | || ||||| |
Sbjct 2067801 A--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATA 2067858
Query 66394 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 66453
| ||||| || || || || |||||| || | |||||| |||| ||| | ||
Sbjct 2067859 TTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAG 2067918
Query 66454 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 66513
||||| || || || | ||| || |||||||| ||||| || || | || | ||||
Sbjct 2067919 GGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGAT 2067978
Query 66514 TGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATT 66572
|||||||||| || || || ||||| | || ||||| || ||||| ||||||||
Sbjct 2067979 TGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATA 2068037
Query 66573 AACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTC 66631
| |||||| || || | |||| | | |||| ||| || || | || ||| ||| | ||
Sbjct 2068038 AGCATGTGTTGGGGCCGTTCAGC-AACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 2068096
Query 66632 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691
|| || || ||||||||||| | ||| |||||||| ||||| | ||| | |||||
Sbjct 2068097 CAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAGTT 2068156
Query 66692 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAAT 66750
|| | ||| | | | | || |||| | | | | ||| || || ||||| ||
Sbjct 2068157 GAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGGGGAGG 2068215
Query 66751 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 66810
||||| |||||| ||||||||||||| | | | ||| | ||| |||| | |
Sbjct 2068216 GTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAATTGCT 2068275
Query 66811 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCG 66870
| || || | |||||| || ||||| || || || | || || | | ||||| || |
Sbjct 2068276 TCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATAGTCGG 2068335
Query 66871 GATG 66874
||||
Sbjct 2068336 GATG 2068339
>seq1
Length=8230860
Score = 109 bits (120), Expect = 7e-19
Identities = 205/299 (69%), Gaps = 3/299 (1%)
Strand=Plus/Plus
Query 36179 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 36238
|||||||| | | || | |||||||| || ||||| |||||||| || || |
Sbjct 2004491 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 2004550
Query 36239 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298
|| ||||| || ||||| ||||| |||||||| ||||| || ||||| || || || ||
Sbjct 2004551 TTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAA 2004610
Query 36299 GCAATAAGTCTCTCTCCATAAC-CGGCACT--GTCATGTATCCACTTTTGAGCCCAATCG 36355
|| | |||| | || | | || | || ||| |||||| ||||||| ||
Sbjct 2004611 GCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTCT 2004670
Query 36356 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 36415
|| ||||| | ||||| ||||| || || || | || ||||| | || || ||
Sbjct 2004671 GCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTCGAACAGATATGTCTTCTCTTTG 2004730
Query 36416 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 36474
|| || ||||| || ||||| | ||| || ||||||||||| || || || || ||
Sbjct 2004731 GGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTGGATATTCTCCAT 2004789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658170521076680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |