Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2 221 2e-52 seq1 118 2e-21 >seq2 Length=7068955 Score = 221 bits (244), Expect = 2e-52 Identities = 749/1144 (65%), Gaps = 22/1144 (2%) Strand=Plus/Plus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 || |||||||| || || || ||||||| | | ||| |||| | || |||||||| Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 || || | ||||| || || || | || || |||||| | || || || ||| Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 || || || || | || || |||||||| |||| | || | || || | ||| | | Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 2067385 Query 79801 ACTC-GAGCCTTTATTATAGACTTGT-ATCTCTTTTCTCTTTCGTAT-TGTGTA-TATA- 79855 || ||||||||| || || | | | | ||| ||| || | | | |||| Sbjct 2067386 TTTCTGAGCCTTTAC---AGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAG 2067442 Query 79856 ATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCA 79915 | |||| ||||||||| || | || ||| | | ||||| || | |||||| | | Sbjct 2067443 AGCGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGA 2067501 Query 79916 ACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 79974 | ||| ||| | | || || |||| ||| || | |||||| |||| | || | Sbjct 2067502 GAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGT 2067561 Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034 | || || || | | |||| ||| || || || |||||| | || | | || Sbjct 2067562 AGAACAAG-TCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAG 2067620 Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094 | | | || | ||||| || || | ||| ||||| | | | || || || || || Sbjct 2067621 TCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTG 2067680 Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || |||||||| | ||| | ||| || ||||| | || | | ||| || |||| || Sbjct 2067681 CCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCG 2067740 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTG 80212 ||||| || |||||||| || | || ||| ||| |||||||||| | | |||| Sbjct 2067741 TTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTG 2067800 Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272 | |||| || || || || | || ||||| | || || || | || ||||| | Sbjct 2067801 A--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATA 2067858 Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332 | ||||| ||||| || || |||||| || | |||||| |||| ||| | || Sbjct 2067859 TTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAG 2067918 Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392 ||||| || || || | ||| || |||||||| ||||| || || | |||| |||| Sbjct 2067919 GGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGAT 2067978 Query 80393 TGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATT 80451 |||||||||| || || ||| ||||| | || ||||| || || || |||||||| Sbjct 2067979 TGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATA 2068037 Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTG-TTATTTATTTTCAACAAGTAAGATTTTTC 80510 | |||||| || || | |||| | | |||| || || || | || ||| ||| | || Sbjct 2068038 AGCATGTGTTGGGGCCGTTCAGC-AACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 2068096 Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 || || || ||||||||||| | ||| |||||||| ||||| | ||| | ||||| Sbjct 2068097 CAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAGTT 2068156 Query 80571 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAAT 80629 || | ||| | | | | || |||| | | | | ||| || || ||||| || Sbjct 2068157 GAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGGGGAGG 2068215 Query 80630 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 80689 ||||| |||||| ||||| ||||||| | | | ||| | ||| |||| | | Sbjct 2068216 GTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAATTGCT 2068275 Query 80690 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTG 80749 | || || | ||||| || ||||| || || || | || || | | ||||| || | Sbjct 2068276 TCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATAGTCGG 2068335 Query 80750 GATG 80753 |||| Sbjct 2068336 GATG 2068339 >seq1 Length=8230860 Score = 118 bits (130), Expect = 2e-21 Identities = 225/330 (68%), Gaps = 6/330 (2%) Strand=Plus/Plus Query 49953 CATCAAA---CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009 ||||||| || || || || ||||| |||||||| | | || || |||||||| Sbjct 2004460 CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGA 2004519 Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069 || ||||| |||||||| || || | || ||||| || ||||| ||||| || || Sbjct 2004520 GAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCC 2004579 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---C 50126 ||| |||||||| ||||| || || || || || || |||| | || | || | | Sbjct 2004580 AGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTC 2004639 Query 50127 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 |||| |||||| ||||||| || || ||||| | ||||| || || || Sbjct 2004640 TTTGTCTGATATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTC 2004699 Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246 ||||| | || ||||| | || || || || || ||||| || || || | ||| Sbjct 2004700 GATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAG 2004759 Query 50247 ACTATACATTTCCGAATGAATGTTTTCAAT 50276 || ||||||||||| || || || || || Sbjct 2004760 GCTGTACATTTCCGAGTGGATATTCTCCAT 2004789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266312994280