Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq2 221 2e-52
seq1 118 2e-21
>seq2
Length=7068955
Score = 221 bits (244), Expect = 2e-52
Identities = 749/1144 (65%), Gaps = 22/1144 (2%)
Strand=Plus/Plus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680
|| |||||||| || || || ||||||| | | ||| |||| | || ||||||||
Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266
Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740
|| || | ||||| || || || | || || |||||| | || || || |||
Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326
Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800
|| || || || | || || |||||||| |||| | || | || || | ||| | |
Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 2067385
Query 79801 ACTC-GAGCCTTTATTATAGACTTGT-ATCTCTTTTCTCTTTCGTAT-TGTGTA-TATA- 79855
|| ||||||||| || || | | | | ||| ||| || | | | ||||
Sbjct 2067386 TTTCTGAGCCTTTAC---AGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAG 2067442
Query 79856 ATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCA 79915
| |||| ||||||||| || | || ||| | | ||||| || | |||||| | |
Sbjct 2067443 AGCGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGA 2067501
Query 79916 ACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 79974
| ||| ||| | | || || |||| ||| || | |||||| |||| | || |
Sbjct 2067502 GAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGT 2067561
Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034
| || || || | | |||| ||| || || || |||||| | || | | ||
Sbjct 2067562 AGAACAAG-TCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAG 2067620
Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094
| | | || | ||||| || || | ||| ||||| | | | || || || || ||
Sbjct 2067621 TCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTG 2067680
Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154
|| |||||||| | ||| | ||| || ||||| | || | | ||| || |||| ||
Sbjct 2067681 CCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCG 2067740
Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTG 80212
||||| || |||||||| || | || ||| ||| |||||||||| | | ||||
Sbjct 2067741 TTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTG 2067800
Query 80213 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| |||| || || || || | || ||||| | || || || | || ||||| |
Sbjct 2067801 A--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATA 2067858
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| ||||| ||||| || || |||||| || | |||||| |||| ||| | ||
Sbjct 2067859 TTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAG 2067918
Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392
||||| || || || | ||| || |||||||| ||||| || || | |||| ||||
Sbjct 2067919 GGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGAT 2067978
Query 80393 TGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATT 80451
|||||||||| || || ||| ||||| | || ||||| || || || ||||||||
Sbjct 2067979 TGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATA 2068037
Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTG-TTATTTATTTTCAACAAGTAAGATTTTTC 80510
| |||||| || || | |||| | | |||| || || || | || ||| ||| | ||
Sbjct 2068038 AGCATGTGTTGGGGCCGTTCAGC-AACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 2068096
Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570
|| || || ||||||||||| | ||| |||||||| ||||| | ||| | |||||
Sbjct 2068097 CAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAGTT 2068156
Query 80571 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAAT 80629
|| | ||| | | | | || |||| | | | | ||| || || ||||| ||
Sbjct 2068157 GAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGGGGAGG 2068215
Query 80630 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 80689
||||| |||||| ||||| ||||||| | | | ||| | ||| |||| | |
Sbjct 2068216 GTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAATTGCT 2068275
Query 80690 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTG 80749
| || || | ||||| || ||||| || || || | || || | | ||||| || |
Sbjct 2068276 TCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATAGTCGG 2068335
Query 80750 GATG 80753
||||
Sbjct 2068336 GATG 2068339
>seq1
Length=8230860
Score = 118 bits (130), Expect = 2e-21
Identities = 225/330 (68%), Gaps = 6/330 (2%)
Strand=Plus/Plus
Query 49953 CATCAAA---CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGA 50009
||||||| || || || || ||||| |||||||| | | || || ||||||||
Sbjct 2004460 CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGA 2004519
Query 50010 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCC 50069
|| ||||| |||||||| || || | || ||||| || ||||| ||||| || ||
Sbjct 2004520 GAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCC 2004579
Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---C 50126
||| |||||||| ||||| || || || || || || |||| | || | || | |
Sbjct 2004580 AGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTC 2004639
Query 50127 GCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186
|||| |||||| ||||||| || || ||||| | ||||| || || ||
Sbjct 2004640 TTTGTCTGATATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTC 2004699
Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246
||||| | || ||||| | || || || || || ||||| || || || | |||
Sbjct 2004700 GATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAG 2004759
Query 50247 ACTATACATTTCCGAATGAATGTTTTCAAT 50276
|| ||||||||||| || || || || ||
Sbjct 2004760 GCTGTACATTTCCGAGTGGATATTCTCCAT 2004789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718266312994280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |