Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 176 7e-39
seq2 118 2e-21
>seq1
Length=8230860
Score = 176 bits (194), Expect = 7e-39
Identities = 356/520 (68%), Gaps = 19/520 (4%)
Strand=Plus/Minus
Query 125244 TTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTAC 125303
|| ||| ||||||| ||||| | ||||||||||||||| || ||||||| ||
Sbjct 2004801 TTTCAAGTCATGATGGAGAATATCCACTCGGAAATGTACAGCCTTCTCATTGACACCTAT 2004742
Query 125304 ATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGCCGTCTAT 125362
| || || ||| | || |||| || || |||| |||||||| | || | ||
Sbjct 2004741 GTAAAGGACCC-CAAAGAGAAGACATATCTGTTCGACGCCATCGACACAATCCCTTGCAT 2004683
Query 125363 ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGA 125422
|| || || || | |||| | || ||||| ||| | |||| | ||| |
Sbjct 2004682 TCGCAAGAAAGCAGACTGGGCTCTGCGATGGATATCAGACAAAGAGTCGAGCTTTGCCCA 2004623
Query 125423 CAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCAT 125482
|||| ||||| ||||| ||||| || ||||||||||| || || ||||| ||||
Sbjct 2004622 ACGACTAGTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCATCCAT 2004563
Query 125483 CTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATC 125542
||| ||||| |||| ||||| |||||||| || || | |||||| | || ||
Sbjct 2004562 CTTCTGGCTGAAGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTC 2004503
Query 125543 TCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCC 125602
||| ||||||||| | ||| |||||||| || || | ||||| |||||| |
Sbjct 2004502 TCGTGACGAGGGCATGCACACGGACTTTGCGTGCCTTTTGAT--GCAAC-ATCTGCAGCA 2004446
Query 125603 CGAGTGCAGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGAT 125659
| || | || || | | ||||| |||||| ||||||| ||||| |||||
Sbjct 2004445 CAAG-CCGGACCC--------ACAACTCATCGAAAACATTATAACCGAAGCCGTCAGGAT 2004395
Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGC 125718
||| | || || || ||||| |||| || ||| ||| || | |||||||||| ||||
Sbjct 2004394 CGAAAAGGAATTCCTCACCGATGCCCTCCCCGTC-GCACTGCTCGGCATGAACTCGAAGC 2004336
Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT 125758
| ||||| ||||||| |||||||| || || ||||| ||
Sbjct 2004335 TCATGTGTCAGTACATTGAGTTTGTTGCTGACCGTCTGCT 2004296
>seq2
Length=7068955
Score = 118 bits (130), Expect = 2e-21
Identities = 320/486 (66%), Gaps = 8/486 (2%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| |||||||| || ||||| ||| | ||| ||||| | || || |||||||| |||
Sbjct 2067688 CAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCAGAC 2067629
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || |||||| | | || | || ||| ||| ||||||| |||| | |||
Sbjct 2067628 GTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAAGGAAGAGGTTAGAGCACGCGAC 2067569
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052
||||| || || | ||| || || ||||||||| | || ||| || || |
Sbjct 2067568 TTGTTCTACGCCATGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAACCAAG-- 2067511
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
| |||| || | || || | | |||| || || |||| || || || |||
Sbjct 2067510 -AATGGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTTGCCGACGTCTATGGTGACGAG 2067452
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGATGC 97171
|| | || ||| | || ||| | |||||||| || |||| || | ||
Sbjct 2067451 TTCAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGTGGTCGCCAGACT-GTAAAGGC 2067393
Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
| |||| ||| | || ||| | ||| ||| || ||||| || || || || ||
Sbjct 2067392 TCAGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAAACTGGGACGCCCTATATGCT 2067333
Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291
||||||||| || ||| | || |||||||| ||||||| |||||| ||||
Sbjct 2067332 CTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACTTGGGGACCATCCGAAGCTC 2067273
Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCT 97351
|||||| ||||| || ||||| || ||| | |||| || ||| || || ||| |||
Sbjct 2067272 CAATCTTTGCACTGAGATTGTCGAATACACGGCTCCCGATGAGGTCGCTGTGTGCAATCT 2067213
Query 97352 GGCATC 97357
||| ||
Sbjct 2067212 GGCCTC 2067207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056634082520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |