Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq5 145 7e-30 >seq5 Length=4609732 Score = 145 bits (160), Expect = 7e-30 Identities = 136/173 (79%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 5582 CGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCG 5641 ||||| ||| || ||| || || ||||||||| | || |||| ||||||| | |||| Sbjct 483436 CGCTCCAAGACCAACTGGGCAATGCGGTCGCCCTTGTTCACCTGGAAATCGGCCTCGCCG 483377 Query 5642 AAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCC 5701 ||||||||||| || || | ||| |||||||||||||| ||||||||||||||| Sbjct 483376 TGGTTGAACAGCAGGACCTTGACCTCGCCTCGGTAGTCGGCGTCAATCACGCCCGCGCCC 483317 Query 5702 ACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754 |||||| ||||| ||| |||||||||| || | ||| || ||||||||||| Sbjct 483316 GTGTCGATAAAGTGTTTGGCCGCCAGGCCCGACCTGGGCGCGACGCGGCCGTA 483264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430052948163224