Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 2e-15 >seq2 Length=7068955 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 25740 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATA 25799 ||| ||||| || | |||| |||||||| |||| |||||||||||||||||| Sbjct 5086253 CTGGTCCACTCCTTTGCCCGTGTAGTCTGTATGGCAGTCCTTGTACTCTGCTCCGAAATG 5086194 Query 25800 CCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCT 25859 | ||| || || ||||| || || || || ||||| || || | || | || ||| Sbjct 5086193 GCGCCATTGAAATCCGTAGACAGGGCCGAGATCTCCTTCCTCGCGGTCAACGAATCCCAA 5086134 Query 25860 CTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCT--TTACCCCCTTCTCGGAG 25917 ||| || | || |||| || || || |||||||||| | | || ||||| ||| Sbjct 5086133 CTTGTCGAGGAATTCTCGCGAGCCGTTCCCGTCCCAGATGTGGATGCCTGCTTCT--GAG 5086076 Query 25918 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973 || || || | ||| | ||| ||||||||||||||||| | |||||||| Sbjct 5086075 AGAGGCTTCGATGTCGTGCAGCCTGATACGAACCACAGCAGCTCGGTGGTGACGGC 5086020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136451716721