Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 352 7e-92
>seq2
Length=7068955
Score = 352 bits (390), Expect = 7e-92
Identities = 1170/1793 (65%), Gaps = 39/1793 (2%)
Strand=Plus/Minus
Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATA--- 363442
||||||| || | |||||| |||||| ||| ||||| ||| | | ||| ||
Sbjct 2068118 ATATTTT-GGTTTCAAGACGCTGGAGAGATCATACCTG-CTC--AAGATTGGCAATCAAG 2068063
Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502
||| |||||| || || || ||| | |||||||| || | ||||| || || |||
Sbjct 2068062 TTGCTGAACGGCCCCAACACATGCTTATGCGTGTGGCAGTGGGTATTCACAGCGACGATA 2068003
Query 363503 TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCAC 363560
|||| || || || || || || || | || | | || || || ||||| |
Sbjct 2068002 TTGAAAAGGCCATCGAGACGTACAATCTCAT--GTCCCAGAAGTGCTTTACCCACGCTTC 2067945
Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAA 363619
||| || | | ||| || ||||| | | | || || |||| || || |||||| |
Sbjct 2067944 GCCCACCCTTTTCAACGCCGGAACCCCTCAACCTCAACTGTCCTCCTG-TTTCTTGATTG 2067886
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679
| ||||| || || ||||||||| || | |||||| || |||| |||||| | || |
Sbjct 2067885 ACATGAAAGAAGACAGCATCGAGGGAATATATGACACCCTCAAGACTTGTGCCATGATCT 2067826
Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTT 363736
|||||| || || || |||||| | | || | || || ||||||| |||| | |
Sbjct 2067825 CCAAGACAGCTGGAGGTATTGGTCT--CAATGCCCATTGCATTCGTGCCACAGGATCCT- 2067769
Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||||| ||||| || ||| || ||||| | ||||||||||| || || | |
Sbjct 2067768 ACATTGCAGGCACCAATGGCACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAATA 2067709
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856
||||||| | |||||||| |||||||| |||||| ||| || ||||| || || |
Sbjct 2067708 ATACTGCTCGCTACGTCGATCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTACC 2067649
Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA-- 363913
||||||| || || || | || || ||| | | || | || ||| |||| ||
Sbjct 2067648 TCGAGCCATGGCACGCAGACGTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAAGG 2067589
Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973
|||||| | | ||||| || ||||||| || | ||| | ||||| || |||
Sbjct 2067588 AAGAGG---TTAGAGCACGCGACTTGTTCTACGCCATGTGGACTCCTGACTTGTTCATGG 2067532
Query 363974 AGCGCGTGGAGGC-AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032
| || || ||| | |||||| || | ||||| || || || || || || |||
Sbjct 2067531 AACGTGTCGAGAAGAACCAAGAAT-GGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTT 2067473
Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092
|||| || | |||||||| | ||||||||||| | ||||| ||||||
Sbjct 2067472 GCCGACGTCTATGGTGACGAGTTCAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGT 2067413
Query 364093 GCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152
| ||| |||| | || ||||| ||||||| ||| ||| | || | |||| ||
Sbjct 2067412 GGTCGCCAGACTGTAAAGGCTCAGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAA 2067353
Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212
|| || || ||||||||| | ||||| || | ||||| | ||| ||||||| || ||
Sbjct 2067352 ACTGGGACGCCCTATATGCTCTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAAC 2067293
Query 364213 CTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271
| || || | || | || ||| || || || |||||| | |||||||| ||||||||
Sbjct 2067292 TTGGGGACCA-TCCGAAGCTCCAATCTTTGCACTGAGATTGTCGAATACACGGCTCCCGA 2067234
Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGAT-- 364326
||| || || || || || || || | || || ||| | || || ||| |
Sbjct 2067233 TGAGGTCGCTGTGTGCAATCTGGCCTCCCTGGCTCTCCCGACATTCGTCGACCAAGCTCG 2067174
Query 364327 -GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGA 364385
||| | |||| | | |||| |||| || || | || ||| |||| || |
Sbjct 2067173 AGGTGAATATGACTTCGGTCGTCTTCATGAGGTCACTCAGGTTGTGACTCGCAACCTAAA 2067114
Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445
|||| ||||||| | || || || || | |||||||| || || | || ||
Sbjct 2067113 CAAGATTATCGATATCAACTACTACCCTGTCCCTGAAGCGAAGAAGAGCAACTTCCGACA 2067054
Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505
|| || | ||||| || || || || ||||| |||| || | ||| | |
Sbjct 2067053 CCGACCCGTCGGTCTCGGAGTTCAAGGTCTCGCCGACGCCTTCCTTGCGCTGCGTCTTCC 2066994
Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565
|| || || || || || | | |||| | ||||| || || || || |||
Sbjct 2066993 TTTCGACTCTCCCGAGGCCAGGCAATTGAATATCCAAATCTTCGAGACCATCTACCATGC 2066934
Query 364566 CGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625
|| | |||||||| ||||| ||||||| |||||| || || || || ||
Sbjct 2066933 TGCTCTCACTGCTTCTTGTGAACTGGCAAAGGAGCAGGGAACATATGAAACATACGAAGG 2066874
Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685
||| | ||||| || | | || | || | ||||||||||| || || | |
Sbjct 2066873 CAGCCCAGTGTCGCAAGGCATTCTTCAATACGACATGTGGAATGTCACTCCCTCAGACTT 2066814
Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745
||| | ||||| | | || | || || ||||||| ||||||||| ||| |
Sbjct 2066813 GTGGGATTGGGACGCCTTGAAAGCCGAGATTGCCAAACATGGTATTCGCAACTCTCTCCT 2066754
Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805
| || ||||||||||| || || ||| | || |||||||| |||||||| ||||||||
Sbjct 2066753 TGTTGCTCCCATGCCCACTGCCTCGACTTCTCAAATCCTCGGCAACAACGAATGCTTCGA 2066694
Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865
||||| ||| ||| | || || ||||| || ||| |||| || || | ||| || ||
Sbjct 2066693 ACCGTACACATCTAATATCTACTCTCGCCGTGTCCTTGCCGGTGAGTTCCAGGTTGTCAA 2066634
Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925
| | || | |||||||| |||| || || ||| |||| ||||||||
Sbjct 2066633 TCCCTGGCTGCTGAAGGATCTCGTCGACTTGGGCCTATGGTCCGACAATATGAAGAATCG 2066574
Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985
|||||||||| || || | || ||||| || |||| | || | || |
Sbjct 2066573 GATCATCGCCGAAGGCGGCTCGATCCAAAACATCCCCAACGTTCCTGCGGACATCAAAGC 2066514
Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045
| | ||||| |||||||||||||| | ||| || || | | ||||| || || ||
Sbjct 2066513 TCTATACAAGACCGTATGGGAAATCAGCCAGCGGACCGTCCTGCAAATGGCAGCGGACCG 2066454
Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCC 365103
||||| || || ||| |||||| | ||| ||||| ||| | ||||||
Sbjct 2066453 TGGTGCCTTCATTGACCAGTCCCAGTCTCTCAAC--ATTCACTTGAAGGAACCAACCATG 2066396
Query 365104 GCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| | || |||||| || || |||||| ||||| ||||| ||
Sbjct 2066395 GGCAAGATCACGAGCATGCACTTTGCAGGCTGGAAAATGGGTCTCAAGACCGG 2066343
Score = 84.2 bits (92), Expect = 6e-11
Identities = 92/120 (77%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 111426 ATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTT-GTCGACAACGA 111484
|| ||||| || || || || || || || || || |||||| || || ||| |||
Sbjct 5086095 ATCTGGGACGGGAACGGCTCGCGAGAATTCCTCGACA-AGTTGGGATTCGTTGACCGCGA 5086153
Query 111485 AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA 111544
||||| |||||||| || || |||||||||||||||||||| || || ||||| |||||
Sbjct 5086154 GGAAGGAGATCTCGGCCCTGTCTACGGATTTCAATGGCGCCATTTCGGAGCAGAGTACAA 5086213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303348974316614
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |