Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 352 7e-92 >seq2 Length=7068955 Score = 352 bits (390), Expect = 7e-92 Identities = 1170/1793 (65%), Gaps = 39/1793 (2%) Strand=Plus/Minus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATA--- 363442 ||||||| || | |||||| |||||| ||| ||||| ||| | | ||| || Sbjct 2068118 ATATTTT-GGTTTCAAGACGCTGGAGAGATCATACCTG-CTC--AAGATTGGCAATCAAG 2068063 Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 ||| |||||| || || || ||| | |||||||| || | ||||| || || ||| Sbjct 2068062 TTGCTGAACGGCCCCAACACATGCTTATGCGTGTGGCAGTGGGTATTCACAGCGACGATA 2068003 Query 363503 TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCAC 363560 |||| || || || || || || || | || | | || || || ||||| | Sbjct 2068002 TTGAAAAGGCCATCGAGACGTACAATCTCAT--GTCCCAGAAGTGCTTTACCCACGCTTC 2067945 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAA 363619 ||| || | | ||| || ||||| | | | || || |||| || || |||||| | Sbjct 2067944 GCCCACCCTTTTCAACGCCGGAACCCCTCAACCTCAACTGTCCTCCTG-TTTCTTGATTG 2067886 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | ||||| || || ||||||||| || | |||||| || |||| |||||| | || | Sbjct 2067885 ACATGAAAGAAGACAGCATCGAGGGAATATATGACACCCTCAAGACTTGTGCCATGATCT 2067826 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTT 363736 |||||| || || || |||||| | | || | || || ||||||| |||| | | Sbjct 2067825 CCAAGACAGCTGGAGGTATTGGTCT--CAATGCCCATTGCATTCGTGCCACAGGATCCT- 2067769 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||||| ||||| || ||| || ||||| | ||||||||||| || || | | Sbjct 2067768 ACATTGCAGGCACCAATGGCACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAATA 2067709 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 ||||||| | |||||||| |||||||| |||||| ||| || ||||| || || | Sbjct 2067708 ATACTGCTCGCTACGTCGATCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTACC 2067649 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA-- 363913 ||||||| || || || | || || ||| | | || | || ||| |||| || Sbjct 2067648 TCGAGCCATGGCACGCAGACGTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAAGG 2067589 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 |||||| | | ||||| || ||||||| || | ||| | ||||| || ||| Sbjct 2067588 AAGAGG---TTAGAGCACGCGACTTGTTCTACGCCATGTGGACTCCTGACTTGTTCATGG 2067532 Query 363974 AGCGCGTGGAGGC-AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032 | || || ||| | |||||| || | ||||| || || || || || || ||| Sbjct 2067531 AACGTGTCGAGAAGAACCAAGAAT-GGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTT 2067473 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 |||| || | |||||||| | ||||||||||| | ||||| |||||| Sbjct 2067472 GCCGACGTCTATGGTGACGAGTTCAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGT 2067413 Query 364093 GCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152 | ||| |||| | || ||||| ||||||| ||| ||| | || | |||| || Sbjct 2067412 GGTCGCCAGACTGTAAAGGCTCAGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAA 2067353 Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212 || || || ||||||||| | ||||| || | ||||| | ||| ||||||| || || Sbjct 2067352 ACTGGGACGCCCTATATGCTCTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAAC 2067293 Query 364213 CTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271 | || || | || | || ||| || || || |||||| | |||||||| |||||||| Sbjct 2067292 TTGGGGACCA-TCCGAAGCTCCAATCTTTGCACTGAGATTGTCGAATACACGGCTCCCGA 2067234 Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGAT-- 364326 ||| || || || || || || || | || || ||| | || || ||| | Sbjct 2067233 TGAGGTCGCTGTGTGCAATCTGGCCTCCCTGGCTCTCCCGACATTCGTCGACCAAGCTCG 2067174 Query 364327 -GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGA 364385 ||| | |||| | | |||| |||| || || | || ||| |||| || | Sbjct 2067173 AGGTGAATATGACTTCGGTCGTCTTCATGAGGTCACTCAGGTTGTGACTCGCAACCTAAA 2067114 Query 364386 CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCA 364445 |||| ||||||| | || || || || | |||||||| || || | || || Sbjct 2067113 CAAGATTATCGATATCAACTACTACCCTGTCCCTGAAGCGAAGAAGAGCAACTTCCGACA 2067054 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGC 364505 || || | ||||| || || || || ||||| |||| || | ||| | | Sbjct 2067053 CCGACCCGTCGGTCTCGGAGTTCAAGGTCTCGCCGACGCCTTCCTTGCGCTGCGTCTTCC 2066994 Query 364506 ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGC 364565 || || || || || || | | |||| | ||||| || || || || ||| Sbjct 2066993 TTTCGACTCTCCCGAGGCCAGGCAATTGAATATCCAAATCTTCGAGACCATCTACCATGC 2066934 Query 364566 CGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG 364625 || | |||||||| ||||| ||||||| |||||| || || || || || Sbjct 2066933 TGCTCTCACTGCTTCTTGTGAACTGGCAAAGGAGCAGGGAACATATGAAACATACGAAGG 2066874 Query 364626 GTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCG 364685 ||| | ||||| || | | || | || | ||||||||||| || || | | Sbjct 2066873 CAGCCCAGTGTCGCAAGGCATTCTTCAATACGACATGTGGAATGTCACTCCCTCAGACTT 2066814 Query 364686 ATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGT 364745 ||| | ||||| | | || | || || ||||||| ||||||||| ||| | Sbjct 2066813 GTGGGATTGGGACGCCTTGAAAGCCGAGATTGCCAAACATGGTATTCGCAACTCTCTCCT 2066754 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 | || ||||||||||| || || ||| | || |||||||| |||||||| |||||||| Sbjct 2066753 TGTTGCTCCCATGCCCACTGCCTCGACTTCTCAAATCCTCGGCAACAACGAATGCTTCGA 2066694 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 ||||| ||| ||| | || || ||||| || ||| |||| || || | ||| || || Sbjct 2066693 ACCGTACACATCTAATATCTACTCTCGCCGTGTCCTTGCCGGTGAGTTCCAGGTTGTCAA 2066634 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925 | | || | |||||||| |||| || || ||| |||| |||||||| Sbjct 2066633 TCCCTGGCTGCTGAAGGATCTCGTCGACTTGGGCCTATGGTCCGACAATATGAAGAATCG 2066574 Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985 |||||||||| || || | || ||||| || |||| | || | || | Sbjct 2066573 GATCATCGCCGAAGGCGGCTCGATCCAAAACATCCCCAACGTTCCTGCGGACATCAAAGC 2066514 Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045 | | ||||| |||||||||||||| | ||| || || | | ||||| || || || Sbjct 2066513 TCTATACAAGACCGTATGGGAAATCAGCCAGCGGACCGTCCTGCAAATGGCAGCGGACCG 2066454 Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCC 365103 ||||| || || ||| |||||| | ||| ||||| ||| | |||||| Sbjct 2066453 TGGTGCCTTCATTGACCAGTCCCAGTCTCTCAAC--ATTCACTTGAAGGAACCAACCATG 2066396 Query 365104 GCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | |||| | || |||||| || || |||||| ||||| ||||| || Sbjct 2066395 GGCAAGATCACGAGCATGCACTTTGCAGGCTGGAAAATGGGTCTCAAGACCGG 2066343 Score = 84.2 bits (92), Expect = 6e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 111426 ATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTT-GTCGACAACGA 111484 || ||||| || || || || || || || || || |||||| || || ||| ||| Sbjct 5086095 ATCTGGGACGGGAACGGCTCGCGAGAATTCCTCGACA-AGTTGGGATTCGTTGACCGCGA 5086153 Query 111485 AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA 111544 ||||| |||||||| || || |||||||||||||||||||| || || ||||| ||||| Sbjct 5086154 GGAAGGAGATCTCGGCCCTGTCTACGGATTTCAATGGCGCCATTTCGGAGCAGAGTACAA 5086213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348974316614