Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq7 98.7 9e-16
seq6 89.7 4e-13
>seq7
Length=4110827
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || ||| | ||||| || | || || | || |||||| ||| |
Sbjct 1063579 ATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 1063520
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| ||||| | |||||| ||||| ||||| || ||||| || || || ||
Sbjct 1063519 GACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1063460
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || |||||||||||||||||| | | | | | | ||| || |||
Sbjct 1063459 CAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAAC 1063400
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || || || || ||
Sbjct 1063399 ATCCAGAAGGAGTCGAC 1063383
>seq6
Length=4175021
Score = 89.7 bits (98), Expect = 4e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| | || |||||| | |||||| ||||| | ||||| ||||| |||
Sbjct 1382997 ATCACCCTTGAGGTCGAGTCGTCCGACACGATCGACAACGTCAAGTCCAAGATCCAAGAC 1383056
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| |||||||| || ||||| || ||| || |||| | || |||||||||||| ||||||
Sbjct 1383057 AAGGAAGGCATCCCGCCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAACTTGAAGAT 1383116
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178
| | ||| | ||||| || ||||| || ||
Sbjct 1383117 GGCCGAACTCTGAGCGACTACAACATCCAGAA 1383148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429934548562935
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |