Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 9e-16 seq6 89.7 4e-13 >seq7 Length=4110827 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || ||| | ||||| || | || || | || |||||| ||| | Sbjct 1063579 ATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 1063520 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | |||||| ||||| ||||| || ||||| || || || || Sbjct 1063519 GACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1063460 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || |||||||||||||||||| | | | | | | ||| || ||| Sbjct 1063459 CAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAAC 1063400 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 1063399 ATCCAGAAGGAGTCGAC 1063383 >seq6 Length=4175021 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| | || |||||| | |||||| ||||| | ||||| ||||| ||| Sbjct 1382997 ATCACCCTTGAGGTCGAGTCGTCCGACACGATCGACAACGTCAAGTCCAAGATCCAAGAC 1383056 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || |||||||| || ||||| || ||| || |||| | || |||||||||||| |||||| Sbjct 1383057 AAGGAAGGCATCCCGCCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAACTTGAAGAT 1383116 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| | ||||| || ||||| || || Sbjct 1383117 GGCCGAACTCTGAGCGACTACAACATCCAGAA 1383148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934548562935