Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 seq7 120 3e-22 seq1 109 5e-19 seq6 96.9 3e-15 seq5 93.3 4e-14 seq4 89.7 5e-13 >seq2 Length=7068955 Score = 123 bits (136), Expect = 2e-23 Identities = 595/927 (64%), Gaps = 23/927 (2%) Strand=Plus/Plus Query 145631 GACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCAC 145690 || |||| ||| || || || ||| |||| | |||||| || ||||| | ||| Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266 Query 145691 AAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCC 145750 | |||| | | |||||| |||| || | ||| || || || || ||||| |||||| Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326 Query 145751 TTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCA 145808 ||||||||||| || || ||||| || ||| | ||| | |||| | || | | Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCAT--A 2067384 Query 145809 AGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCT 145868 | ||| || || ||| | |||||||| | || ||| || ||| || Sbjct 2067385 GTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAG 2067444 Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928 | | ||| || ||| ||| |||| ||||| || || | ||||| | || | Sbjct 2067445 CGTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGAGAG 2067504 Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988 |||| | ||| | ||| || ||||| ||||| || || ||||| ||||| | Sbjct 2067505 TCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGA 2067564 Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCAC--CCATGTTTCGCT-TCAAATT-AAGCACA 146044 ||||||||| ||| | | |||| | || || ||| | ||| || || | Sbjct 2067565 ACAAGTCGCGTGCTCT---AACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGT 2067621 Query 146045 CTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---G 146101 | | | | ||| |||||||| || || | |||| ||| | || ||| || || | Sbjct 2067622 CGA-ACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTG 2067680 Query 146102 CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCG 146161 |||||||| || |||| || | | || || |||||||| | |||||| | ||| Sbjct 2067681 CCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCG 2067740 Query 146162 CTGGCTACGCCGTTCGTAGAGTTTATTCT-GGTGCCGCGGGAGCGCACGCAATGAACATT 146220 ||| ||| || || | | | | | || || || || | |||||| |||| Sbjct 2067741 TTGGAGGTGCCATTGGT-GCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATT 2067799 Query 146221 CACGCCGAGACCGCC-GCCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAG 146278 | || | ||| || || || |||||| || ||| || ||| ||| || || || Sbjct 2067800 GAGACCAATACCTCCAGCTGT-CTTGGAGATCATGGCACAAGTCTT-GAGGGTGTCATAT 2067857 Query 146279 ATGCCGTCAATGCTATCGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATC 146338 || || || ||||| || | ||| | | || || || ||| ||| || | Sbjct 2067858 ATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGA 2067917 Query 146339 GGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCAT 146397 || || || || ||| | || || ||||| ||||| || || | || ||| | Sbjct 2067918 GGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGA-CATGAG 2067976 Query 146398 CCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCAT 146457 ||||| ||||| || | || ||| ||||||| ||||| |||| || || ||||| Sbjct 2067977 ATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACACGCAT 2068036 Query 146458 GAGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTC 146517 ||||||||||||||||| || || ||||||||| ||||||| | || || |||| Sbjct 2068037 AAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTC 2068096 Query 146518 CAGGGTTTTGTATCCGAAAAATTTGTA 146544 ||| || ||| | || ||| ||| ||| Sbjct 2068097 CAGCGTCTTGAAACCAAAATATTGGTA 2068123 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 12/232 (5%) Strand=Plus/Plus Query 145056 GATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGG 145115 ||||||| ||||| ||||| ||||| | ||||| || | || | ||||| ||| | | Sbjct 2066632 GATTGACAACCTGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACG 2066691 Query 145116 GTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCA 145175 |||| || | ||||| ||||| |||||||||| |||| || ||||||||| || | Sbjct 2066692 GTTCGAAGCATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAA 2066751 Query 145176 CCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTA--GCGTACCCCAATC 145233 | | | || ||||| | || || || || || | || | |||| ||||||| Sbjct 2066752 CAAGGAGAGAGTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGT--CCCAATC 2066809 Query 145234 CCATAGCGAAGTC----GGCCTCACGTCCCACATGTCGTACTGCAAAATGCC 145281 ||| | |||| || | || | |||||||||||| || | |||||| Sbjct 2066810 CCACA----AGTCTGAGGGAGTGACATTCCACATGTCGTATTGAAGAATGCC 2066857 >seq7 Length=4110827 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | |||||||||||| || |||||||| ||| Sbjct 1063352 GCCGCCACGGAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 1063411 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||| || || |||||||| ||| |||| | |||||||||||||| || Sbjct 1063412 CAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 1063471 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || |||| | || | || ||| ||||||||| Sbjct 1063472 GATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGAC 1063531 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || || || ||||| || |||||| Sbjct 1063532 CTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCATG 1063580 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| | |||||| || || | || |||||| || |||||||| ||||| Sbjct 1062896 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1062955 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || ||| |||||| | ||||||||| ||| | || | ||||||||||||||||| Sbjct 1062956 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 1063015 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||||| | || | || || | | ||| | Sbjct 1063016 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCAC 1063075 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || || || |||||||| || ||||| Sbjct 1063076 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || ||||| | ||| | ||||| ||||| || |||||||| || Sbjct 1063125 CCGCCGCGGAGCCGGAGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAG 1063184 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| || |||| | ||||||||||| || ||| Sbjct 1063185 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 1063244 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || ||| | || || | Sbjct 1063245 ATCCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAACC 1063304 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || || || |||||||| || |||||| Sbjct 1063305 TCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCATG 1063352 >seq1 Length=8230860 Score = 109 bits (120), Expect = 5e-19 Identities = 270/404 (67%), Gaps = 7/404 (2%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCG-C 46142 || || ||| | ||||||||| | |||||||| || ||||| | ||| | | | Sbjct 2004693 ATCCCTTGCATTCGCAAGAAAGCAGACTGGGCTCTGCGATGGAT-ATCAGACAAAGAGTC 2004635 Query 46143 GACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAG 46202 || || ||| | || | ||||| || || || || ||| |||| || ||||| Sbjct 2004634 GAGCTTTGCCCAACGACTAGTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATC 2004575 Query 46203 TTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 ||||| ||||||| | | || | ||| || | ||||||||||| || || ||| Sbjct 2004574 CTTTGCATCCATCTTCTGGCTGAAGAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAA 2004515 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTC-TCTACTATAACA 46321 |||||| || || || ||||||||| |||| |||||||||||||| | | | | |||| Sbjct 2004514 CGAGCTCATCTCTCGTGACGAGGGCATGCACACGGACTTTGCGTGCCTTTTGATGCAACA 2004455 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGG 46381 || |||| |||||| | || | | | | ||| | | || || || Sbjct 2004454 -TC---TGCAGCACAAGCCGGACCCACAACTCATCGAAAACATTATAACCGAAGCCGTCA 2004399 Query 46382 CCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC 46441 || || ||||| || | || | || || |||| || ||||| ||||||||| | Sbjct 2004398 GGATCGAAAAGGAATTCCTCACCGATGCCCTCCCCGTCGCACTGCTCGGCATGAACTCGA 2004339 Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTC 46485 || ||||| | ||||| |||||||| || ||||| |||||| Sbjct 2004338 AGCTCATGTGTCAGTACATTGAGTTTGTTGCTGACCGTCTGCTC 2004295 >seq6 Length=4175021 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| || || || || || |||||||| ||| ||| Sbjct 1383150 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGA 1383091 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || ||||| ||||| ||||| ||| || ||||| | | Sbjct 1383090 TCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 1383031 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||||| || | ||| | ||| || || || || || || |||| Sbjct 1383030 CGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1382971 Query 131225 A 131225 | Sbjct 1382970 A 1382970 >seq5 Length=4609732 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | || |||| | ||| | ||||| ||||| || |||||||| ||| Sbjct 1364975 GCCGCCGCGGAGGCGGGGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGA 1365034 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||||| |||||| ||||||||||| || |||| | ||||||||||| | | Sbjct 1365035 CCTGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGT 1365094 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| || || ||||| | | | || ||| | ||||| | Sbjct 1365095 GATCCCTTCCTTGTCCTAAATCTTGCTCTTGATGTTGTTGATTGTGTCGCTCGACTCAAC 1365154 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || | || || || || | ||||||||||||| Sbjct 1365155 CTCCAGCGTGATCGTCTTGACAGTAAGTGTCTTCATGAAAATCTGCATG 1365203 >seq4 Length=6030834 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| || | || | |||||| ||||| || |||||||| ||| Sbjct 3720711 CCACCGCGAAGACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAG 3720652 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || || |||||||| ||| |||| | || ||||||||||| || Sbjct 3720651 AGAGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGA 3720592 Query 131128 ATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 3720591 ATGCCTTCCTTGTC 3720578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011165655680