Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2 239 6e-58
seq1 109 7e-19
>seq2
Length=7068955
Score = 239 bits (264), Expect = 6e-58
Identities = 752/1145 (66%), Gaps = 24/1145 (2%)
Strand=Plus/Plus
Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812
|| |||||||| || || || ||||||| | | ||| |||| | ||||||||||||
Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266
Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872
||||| | |||||| || || || | || || |||||| | || || || |||
Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326
Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932
|| || || || | || || |||||||| |||| | || | || || | ||| | |
Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATA-G 2067385
Query 62933 ACTC-GAGCCTTTATTATAGATTTGT-ATCTCTTTTCTCTTTCGTATAGT----GTATAC 62986
|| ||||||||| || | | | | | ||| ||| ||| |||||
Sbjct 2067386 TTTCTGAGCCTTTAC---AGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAG 2067442
Query 62987 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATC 63046
| |||| ||||||||| || | || | | | || ||||| |||| ||||| |
Sbjct 2067443 AG-CGTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAG 2067500
Query 63047 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63105
| | ||| ||| || | || || |||| ||| || | |||||| |||| | ||
Sbjct 2067501 AGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCG 2067560
Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165
|| || || || | | |||| || || || || |||||| | || | | ||
Sbjct 2067561 TAGAACAAG-TCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAA 2067619
Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225
| | | || | ||||| || || | ||| ||||| | | | || || || || ||
Sbjct 2067620 GTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATT 2067679
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
|| |||||||| | ||| | ||| || ||||| | || | | ||| || |||| ||
Sbjct 2067680 GCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCC 2067739
Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATT 63343
||||| || |||||||| |||| || ||| ||| |||||||||| | | |||
Sbjct 2067740 GTTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATT 2067799
Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 63403
|| |||| || || || || | || ||||| | || || || | || |||||
Sbjct 2067800 GA--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATAT 2067857
Query 63404 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63463
|| ||||| || || || || |||||| || | |||||| |||| ||| | ||
Sbjct 2067858 ATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGA 2067917
Query 63464 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGA 63523
||||| || || || | ||| || |||||||| ||||| || || | || | |||
Sbjct 2067918 GGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGA 2067977
Query 63524 TTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCAT 63582
||||||||||| || || || ||||| | || ||||| || ||||| ||||||||
Sbjct 2067978 TTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCAT 2068036
Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTT 63641
| |||||| || || | |||| | | |||| ||| || || | || ||| ||| | |
Sbjct 2068037 AAGCATGTGTTGGGGCCGTTCAGC-AACTTGATTGCCAATCTTGAGCAGGTATGATCTCT 2068095
Query 63642 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701
||| || || ||||||||||| | ||| |||||||| ||||| | ||| | ||||
Sbjct 2068096 CCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAGT 2068155
Query 63702 TGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATAGGAAAA 63760
||| | ||| | | | | || |||| | | | | ||| || || || || |
Sbjct 2068156 TGAACTCATCAGCGTGTCTCATGAC-ACATTCGTAGGTCTCCTTGGAGATCATCGGGGAG 2068214
Query 63761 TGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 63820
||||| |||||| ||||||||||||| | | | ||| | ||| |||| |
Sbjct 2068215 GGTTTCTGATTTTTCGGATTGACATAGTGGTAGAGGTCCGAGACCACGGAGGAAAATTGC 2068274
Query 63821 ttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCC 63880
|| || || | |||||| || ||||| || || || | || || || | ||||| ||
Sbjct 2068275 TTCTTGGTCTGTTTGTGGAGGTTTGAAACAGCGATACGTGCTGCGAGGACTGCATAGTCG 2068334
Query 63881 GGATG 63885
|||||
Sbjct 2068335 GGATG 2068339
>seq1
Length=8230860
Score = 109 bits (120), Expect = 7e-19
Identities = 205/299 (69%), Gaps = 3/299 (1%)
Strand=Plus/Plus
Query 32682 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 32741
|||||||| | | || | |||||||| || ||||| |||||||| || || |
Sbjct 2004491 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 2004550
Query 32742 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 32801
|| ||||| || ||||| ||||| |||||||| ||||| || ||||| || || || ||
Sbjct 2004551 TTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAA 2004610
Query 32802 GCAATAAGTCTCTCTCCATAAC-CGGCGCT--GTCATGTATCCACTTTTGAGCCCAATCG 32858
|| | |||| | || | | || | || ||| |||||| ||||||| ||
Sbjct 2004611 GCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTCT 2004670
Query 32859 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 32918
|| ||||| | ||||| ||||| || || || | || ||||| | || || ||
Sbjct 2004671 GCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTCGAACAGATATGTCTTCTCTTTG 2004730
Query 32919 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 32977
|| || ||||| || ||||| | ||| || ||||||||||| || || || || ||
Sbjct 2004731 GGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTGGATATTCTCCAT 2004789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633629806049200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |