Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
>seq1
Length=8230860
Score = 107 bits (118), Expect = 2e-18
Identities = 324/492 (66%), Gaps = 14/492 (3%)
Strand=Plus/Plus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
||||| ||||| || ||||||||| |||| | | | ||||| || || || ||
Sbjct 2004305 TCAGCAACAAACTCAATGTACTGACACATGAGCTTCGAGTTCATGCCGAGCAGTGCGACG 2004364
Query 92987 GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTATT 93046
|| || || ||||| | ||| || || ||||| |||||||| | | || | |
Sbjct 2004365 GGGAGGGCATCGGTGAGGAATTCCTTTTCGATCCTGACGGCTTCGGTTATAATGTTT--- 2004421
Query 93047 ACTCTACTATTTGGTGGTTT---TTGTACGACATAA-TTGTA-CATTAAGCACGCAAAGT 93101
|| | | ||| ||| |||| | || | ||| | || | |||||||||||
Sbjct 2004422 --TCGATGAGTTGTGGGTCCGGCTTGTGCTGCAGATGTTGCATCAAAAGGCACGCAAAGT 2004479
Query 93102 CGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACA 93161
| || || | || ||||| || || || | ||| ||| ||| || | || || | ||
Sbjct 2004480 CCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCA 2004539
Query 93162 GTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCA 93221
||||| |||| ||||| || || || ||||| ||||| || || || ||||| |
Sbjct 2004540 GTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGA 2004599
Query 93222 CGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-CGGAATTACTGCTGATCCATTTT 93280
||||||| || ||||| | |||| |||||| | | | | ||| | ||||||
Sbjct 2004600 CGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGAT-ATCCATCGC 2004658
Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTA- 93339
| |||||| || ||||| || ||| ||||| | ||| ||||| |||| || || ||
Sbjct 2004659 AGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTCGAACAGATAT 2004718
Query 93340 ATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATG 93399
||| ||| | | || || || || || || | || |||||||| || ||
Sbjct 2004719 GTCT-TCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTG 2004777
Query 93400 GACATTCTCCAT 93411
|| |||||||||
Sbjct 2004778 GATATTCTCCAT 2004789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556858871869480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |