Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq7 89.7 4e-13
seq6 89.7 4e-13
>seq7
Length=4110827
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|||||||| ||||||| || || || | ||| || || || |||||||| |||||
Sbjct 1062897 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 1062956
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| ||| || || || | || || || ||| | || || ||||| ||||||||||||
Sbjct 1062957 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 1063016
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
||||| || ||||| ||||| || | | || | ||||| | | || ||
Sbjct 1063017 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACC 1063076
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | ||| ||||| || || || ||||| || || |||||
Sbjct 1063077 TCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123
>seq6
Length=4175021
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|| || |||||||| ||||||| ||| || |||||||||||| || || ||| ||||
Sbjct 1383148 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATC 1383089
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
| ||||| ||||| || || |||||||| ||||| ||||| || | | ||
Sbjct 1383088 AATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 1383029
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373
| ||||||| || ||||| || | ||| | || ||||| || || || || || ||
Sbjct 1383028 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1382970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420132981652524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |