Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 232 1e-55 seq1 150 3e-31 >seq2 Length=7068955 Score = 232 bits (256), Expect = 1e-55 Identities = 1088/1701 (64%), Gaps = 79/1701 (5%) Strand=Plus/Plus Query 243760 GGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGGAG 243819 ||| ||| | || | |||||||||||||||||||||||| || | |||| | | Sbjct 2066315 GGCCGCCATCGTGCGCAGGTAGTACATGCCGGTCTTGAGACCCATTTTCCAGCCTGCAAA 2066374 Query 243820 GTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGGTT 243879 ||||||| ||| | ||| ||| | || ||| |||| | ||| | || Sbjct 2066375 GTGCATGCTCGTGATCTTGCCCAT-----GGTT--GGT--TCCTTCAAGTGAATG---TT 2066422 Query 243880 GAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA-GGTCCT 243938 ||| |||||| |||||| | ||||| | || || || ||||| | || ||||| Sbjct 2066423 GAGAGACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCATTTGCAGGACGGTCCG 2066482 Query 243939 TCTGA--GATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTC 243996 ||| ||| || |||||| |||||||| | | |||| || | | || ||| | Sbjct 2066483 -CTGGCTGATTTCCCATACG--GTCTTGTATAGAGCTTTGATGTCCGCAGG-AACGTTGG 2066538 Query 243997 G-ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACA 244055 | ||||| || | |||||| | | |||||| | | | ||| || ||| ||| | Sbjct 2066539 GGATGTTTTGGATCGAGCCGCCTTCGGCGATGATCCGATTCTTCATATTGTCGGACCATA 2066598 Query 244056 GGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACCACCTGAAACTCTCCCG 244112 |||||||| | || ||| | ||| || | || || ||||| ||||| || | Sbjct 2066599 GGCCCAAGTCGACGAGATCCTTCAGCAG---CCAGGGATTGACAACCTGGAACTCACCGG 2066655 Query 244113 ACAGCACGCGGCGCTGGTAGAGGTT-GCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCC 244171 || || ||||| ||||| || | || || ||| |||| || || ||||||| Sbjct 2066656 CAAGGACACGGCGAGAGTAGATATTAGATG-TGTACGGTTCGAAGCATTCGTTGTTGCCG 2066714 Query 244172 AGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCG 244231 || || || | || ||||| |||||||| | || || ||| ||| | | || Sbjct 2066715 AGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTGCGAATACCA 2066774 Query 244232 TGCCTCTGG--ATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGC 244289 || | ||| || | | | | ||| ||| ||||||| | | ||| | Sbjct 2066775 TG--TTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAGGGAG------ 2066826 Query 244290 GTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTG-ACGGGGCTGCCCTCGTAG 244348 ||| ||||||||| | || || | || |||| || |||||||| ||||| Sbjct 2066827 ---TGACATTCCACATGTCGTATTGAAGAATGCC-TTGCGACACTGGGCTGCCTTCGTAT 2066882 Query 244349 GTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAG 244408 || || | || | || ||||| | ||| | ||| || || | |||| Sbjct 2066883 GTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTAG 2066942 Query 244409 ATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCC 244468 |||||||||||||| | |||| | | ||||| | || ||| || | | | Sbjct 2066943 ATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAGGAAGACGC 2067002 Query 244469 ATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTG 244528 | | | |||| ||||||| || || || || |||| |||| ||||| |||||| | Sbjct 2067003 AGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAG 2067062 Query 244529 TTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTG 244588 ||| | | ||||| || || ||||| ||||| ||||| | |||||| |||||| Sbjct 2067063 TTGCTCTTCTTCGCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGTTG 2067122 Query 244589 CGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTC 244647 || || | || | || ||| || || | ||||| || || || | | Sbjct 2067123 CGAGTCA-CAACCTGAGTGACCTCATGAAGACGACCGAAGTCATATTCACCTCGAGCTTG 2067181 Query 244648 GGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCAC 244707 | ||| | || ||| ||| || | | |||||| ||||| || || || Sbjct 2067182 GTCGACG-----------AATGTCGG-GAGAGCCAGGGAGGCCAGATTGCACACAGCGAC 2067229 Query 244708 CTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCC 244767 ||| || | ||||| | ||||||||| ||||| || || || |||||| || Sbjct 2067230 CTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCC 2067289 Query 244768 CAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCC 244827 || || || || ||| ||| ||||||||||||||||||||||| ||||| ||| Sbjct 2067290 CAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCC 2067349 Query 244828 GGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCG 244887 || ||| ||| || |||||| | ||| || | | |||||| || ||| ||| Sbjct 2067350 AGTTTCGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACAGTCTGGCG 2067409 Query 244888 AGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTC 244947 | | |||||| ||| || | ||| || || | ||||||| || |||| || Sbjct 2067410 ACCACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTC 2067469 Query 244948 GTCTAGGCC-GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCC 245006 | | ||||| || || | | || || | |||| |||| || | | || ||| | Sbjct 2067470 GGCAAGGCCAGGTGCCTCATG-AGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACAC 2067528 Query 245007 TCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCT--GCTC 245064 | |||||| | ||| || |||| | ||| | ||| | ||| | || |||| ||| Sbjct 2067529 GTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGC--GTGCTCTAACCTC 2067586 Query 245065 GTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTC 245124 ||| ||| |||||| ||||| | ||||||||| || ||||| ||||||| ||||| Sbjct 2067587 TTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTC 2067646 Query 245125 CATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAG 245184 | ||||| || | || || || ||||| ||||| ||||| || | | | |||| Sbjct 2067647 GAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGA----CGTAGCGAG 2067702 Query 245185 C----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCT 245240 | ||||||| ||| || | || | | ||||| ||| ||| |||||||| Sbjct 2067703 CAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTGGTGCCTG 2067762 Query 245241 TGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGGCG 245296 ||||||| || || | | | ||| |||| ||| || | || || || Sbjct 2067763 CAATGTAGGATCCTGTGGCAC---GAATGC-AATGGGCATTGAGACCAATACCTCCAGCT 2067818 Query 245297 TGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGAC 245356 ||||||||| | ||| || |||||| |||||| ||| ||||| |||||||| Sbjct 2067819 GTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCT 2067878 Query 245357 TTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGA 245416 ||||||| | || || ||||||||||| || || | ||| | | | |||||| || Sbjct 2067879 TTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGG 2067938 Query 245417 GTGGGGCTGGCGTGGGTAAAG 245437 ||||| |||||||||||| Sbjct 2067939 GTGGGCGAAGCGTGGGTAAAG 2067959 >seq1 Length=8230860 Score = 150 bits (166), Expect = 3e-31 Identities = 294/427 (69%), Gaps = 13/427 (3%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||| | ||||| || || || || ||||| ||||| || |||||||| || Sbjct 2004714 CTGTTCGACGCCATCGACACAATCCCTTGCATTCGCAAGAAAGCAGACTGGGCTCTGCGA 2004655 Query 42669 TGGATCGAGAGTCCC-GACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||| || | || | | || | | | | || || || || | |||||||| Sbjct 2004654 TGGATATC-AGACAAAGAGTCGAGCTTTGCCCAACGACTAGTGGCTTTCGCAGCCGTCGA 2004596 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG--AAGGTGTCG 42785 |||||||||||||| || |||| || |||||||||||||| ||| || |||| | | Sbjct 2004595 AGGCATCTTCTTCTCTGGATCCTTTGCATCCATCTTCTGGCTGAAG-AGCAAAGGACT-G 2004538 Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGAC 42845 |||||||| ||||||||||| ||||| |||||| | |||||||| |||| | |||| Sbjct 2004537 ATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACGGAC 2004478 Query 42846 TTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG--GCACAAGCCCTCGAAGGAGCGGGTCC 42903 ||||| ||||| || | || || || | ||||||||| | | || Sbjct 2004477 TTTGCGTGCCTTTTGAT-----GCAACATCTGCAGCACAAGCCGGACCCACAACTCATCG 2004423 Query 42904 GGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCG 42963 ||| || || || ||||| |||||| ||||| |||||||| | | || |||| Sbjct 2004422 AAAACATTATAACCGAAGCCGTCAGGATCGAAAAGGAATTCCTCACCGATGCCCTCCCCG 2004363 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 | | ||| ||||||||||| | |||||||| ||||||| ||| || || |||| Sbjct 2004362 TCGCACTGCTCGGCATGAACTCGAAGCTCATGTGTCAGTACATTGAGTTTGTTGCTGACC 2004303 Query 43024 ATCTCCT 43030 ||| || Sbjct 2004302 GTCTGCT 2004296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335930225520