Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 307 1e-78 >seq2 Length=7068955 Score = 307 bits (340), Expect = 1e-78 Identities = 1085/1671 (65%), Gaps = 38/1671 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | || |||| ||||| || ||||||| || ||||| |||||||| |||| Sbjct 2068126 AACTACCAATATTTTGGTTTCAAGACGCTGGAGAGATCATACCTGCTCAAGAT---TGGC 2068070 Query 93775 AGG---GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGC 93831 | ||| | || || || || || |||| ||||| || || | || |||||| || Sbjct 2068069 AATCAAGTTGCTGAACGGCCCCAACACATGCTTATGCGTGTGGCAGTGGGTATTCACAGC 2068010 Query 93832 CACGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG 93891 |||| || || | | | | | || |||| | ||| | | |||| Sbjct 2068009 GACGATATTGAAAAGGCCATCGAGACGTACAATCTCATGTCCCAGAAGTGCTTTACCCAC 2067950 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || | || ||||| |||||||| || ||||| || || |||| || |||||| || Sbjct 2067949 GCTTCGCCCACCCTTTTCAACGCCGGAACCCCTCAACCTCAACTGTCCTCCTGTTTCTTG 2067890 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 || ||| | || | ||| |||| ||||| | |||| ||||||| ||||| | Sbjct 2067889 ATTGAC-ATGAAAGAAGACAGCATCGAGGGAATATATGACACCCTCAAGACTTGTGCCAT 2067831 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || || || || || || ||| || ||| | | ||||||| || || Sbjct 2067830 GATCTCCAAGACAGCTGGAGGTATTGGTCTCAATGCCCATTGCATTCGTGCCACAGGATC 2067771 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| || |||||||||||||||||||| || |||| ||||| || |||||||| Sbjct 2067770 CTACATTGCAGGCACCAATGGCACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAA 2067711 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 || | || |||||||| || |||||||| | | | ||| |||| || |||| Sbjct 2067710 TAATACTGCTCGCTACGTCGATCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTA 2067651 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 |||||||| |||||||| |||||| | || | ||||| |||||||||||||||| Sbjct 2067650 CCTCGAGCCATGGCACGCAGACGTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAA 2067591 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || || || | ||| | |||||||| | ||| || ||| | || ||| | Sbjct 2067590 GGAAGAGGTTAGAGCACGCGACTTGTTCTACGCCATGTGGACTCCTGACTTGTTCATGGA 2067531 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 ||| |||||||| ||| | |||| ||| || ||||| |||| || || || | Sbjct 2067530 ACGTGTCGAGAAGAACCAAGAATGGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTTGC 2067471 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 |||||| | ||| | || || || || | || | | || || | ||||| | Sbjct 2067470 CGACGTCTATGG-TGACGAGTTCAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGTG 2067412 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | || | | | ||| ||| || ||| || ||| | || | |||| || | Sbjct 2067411 GTCGCCAGACTGTAAAGGCTCAGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAAA 2067352 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || |||||||| || | | ||||||| | ||| ||| ||||||| || || Sbjct 2067351 CTGGGACGCCCTATATGCTCTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACT 2067292 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | ||| ||| ||||| ||||| ||||| ||||||||||| || || |||| || | Sbjct 2067291 TGGGGACCATCCGAAGCTCCAATCTTTGCACTGAGATTGTCGAATACACGGCTCCCGATG 2067232 Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGC-CTA 94667 || | |||||||| || |||| |||| | || | || ||||| ||| | || | | Sbjct 2067231 AGGTCGCTGTGTGCAATCTGGCCTCCCTGGCTCTCCCGACATTCGT-CGACCAAGCTCGA 2067173 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG-GTCT 94726 | || ||||| ||| ||| | ||| | ||| ||| || | || Sbjct 2067172 GGTGAATATGACTTCGGTCG-TCTTCATGAGGT----CACT-------CAGGTTGTGACT 2067125 Query 94727 TG-AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 | ||||| |||| | | ||||| | |||| |||||| ||||| || ||| |||| Sbjct 2067124 CGCAACCTAAACAAGATTATCGATATCAACTACTACCCTGTCCCTGAAGCGAAGAAGAGC 2067065 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| | || || ||| |||| |||| || || ||| |||| ||||| | | | Sbjct 2067064 AACTTCCGACACCGACCCGTCGGTCTCGGAGTTCAAGGTCTCGCCGACGCCTTCCTTGCG 2067005 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 ||||||| || | ||||||| ||| || | |||||| | | || ||||| | | Sbjct 2067004 CTGCGTCTTCCTTTCGACTCTCCCGAGGCCAGGCAATTGAATATCCAAATCTTCGAGACC 2066945 Query 94906 ATTTATTACGGGGCCATGAAACAATC-CGTCCACTTGGCCAGATCGGACGGCGGGCCACA 94964 || || | | || | | || || || |||| | ||| || || | Sbjct 2066944 ATCTACCATGCTGCTCTCACTGCTTCTTGTGAAC-TGGC---AAAGGAGCAGGGAACATA 2066889 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 ||| | | | || || || || |||||| |||| | |||| | ||| ||| Sbjct 2066888 TGAAACATACGAAGGCAGCCCAGTGTCGCAAGGCATTCTTCAATACGACATGTGGAATGT 2066829 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 | ||||| | ||| || ||||| || | || || || |||||| ||| | Sbjct 2066828 CACTCCCTCAGACTTGTGGGATTGGGACGCCTTGAAAGCCGAGATTGCCAAACATGGTAT 2066769 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 ||| | || ||||| || ||||||||||| ||||| || | || ||||| ||||| Sbjct 2066768 TCGCAACTCTCTCCTTGTTGCTCCCATGCCCACTGCCTCGACTTCTCAAATCCTCGGCAA 2066709 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||| | |||||||| | ||| || || | ||| | || || || ||||| || Sbjct 2066708 CAACGAATGCTTCGAACCGTACACATCTAATATCTACTCTCGCCGTGTCCTTGCCGGTGA 2066649 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTG 95263 |||| || |||| || || ||| || | || || |||| | ||| | Sbjct 2066648 GTTCCAGGTTGTCAATCCCTGGCTGCTGAAGGATCTCGTCGACT-TGGGCCTATGGTCCG 2066590 Query 95264 ACAAGGTCAAGAACCAACTGCTACGCGCCAA--CGGCTCCGTCCAGAACATCCCGCAAAT 95321 |||| | ||||| | | | ||| | || |||||| |||| |||||||| | | Sbjct 2066589 ACAATATGAAGAATCGGAT-CATCGC-CGAAGGCGGCTCGATCCAAAACATCCCCAACGT 2066532 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || | ||||||||| || || ||||||||||| ||||| ||| ||||| Sbjct 2066531 TCCTGCGGACATCAAAGCTCTATACAAGACCGTATGGGAAATCAGCCAGCG 2066481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721487020920