Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 6e-31
seq1 129 6e-25
seq7 107 2e-18
seq6 87.8 2e-12
>seq2
Length=7068955
Score = 149 bits (164), Expect = 6e-31
Identities = 1189/1886 (63%), Gaps = 78/1886 (4%)
Strand=Plus/Plus
Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778
|||||| ||||| || | | ||| | ||||| | |||||||| ||||||||||||||
Sbjct 2066288 GTCGACAGTGAATTGAATAGGTTGTGTGGCCGCCATCGTGCGCAGGTAGTACATGCCGGT 2066347
Query 145779 CTTGAGCTGTTTCTGCCA-CGTGTAAAAGTGTATGCTCGACAT---GACCGAGTACGTGG 145834
|||||| | | ||| | || ||| ||| ||||||| || | || | || |
Sbjct 2066348 CTTGAGACCCATTTTCCAGCCTGCAAA-GTGCATGCTCGTGATCTTGCCCATG---GTTG 2066403
Query 145835 GTTCGGCGACAAACAAATTT--AGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGC 145892
|||| | ||| ||| | ||||| ||| ||| |||||||| | | | ||||| ||
Sbjct 2066404 GTTC--CTTCAAGTGAATGTTGAGAGACTGGGACTGGTCAATGAAGGCACCACGGTCCGC 2066461
Query 145893 GGCCATGTCTATCATGCACTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTTGAC 145952
||||| | | | | | | ||||||||| |||| || | ||| | ||||
Sbjct 2066462 TGCCATTTGCAGGACGGTCCGCTGGCTGATTTCCCATACGGTCTTGTATAGAGCTTTGAT 2066521
Query 145953 GTGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCG 146012
|| | || | | | ||||| || | || || |||||| | || ||
Sbjct 2066522 GTCCGCAGGAACGTTGGGGATGTTTTGGATCGAGCCGCCTTCGGCGATGATCCGATTCTT 2066581
Query 146013 CA-ATTCTGGAGTGTAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCA 146071
|| ||| | | | | | | |||||| ||||| |||| | || | | ||||| |
Sbjct 2066582 CATATTGTCG-GACCATAGGCCCAAGTCGACGAGATCCTTCAGCAGCCAGGGATTGACAA 2066640
Query 146072 CCTGAAACTCGCCGGCGAGAACGCGCCTCAGA-TACACGTTGCTGGTGAACGGCTCGAAC 146130
|||| ||||| ||||| || || || | ||| || | || ||| |||| |||||
Sbjct 2066641 CCTGGAACTCACCGGCAAGGACACGGCG-AGAGTAGATATTAGATGTGTACGGTTCGAAG 2066699
Query 146131 GACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAA 146190
| |||||||| ||||| || || | |||| || || |||||| || || || | |
Sbjct 2066700 CATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGA 2066759
Query 146191 GAGTTTCTCACGCCGTGTCTTTGAATCT----TTTCCCGTAGTTTGGACCAATTCCACAA 146246
||||| | | || ||| | ||||| |||| | || ||||| ||||||
Sbjct 2066760 GAGTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTC----CCAATCCCACAA 2066815
Query 146247 ATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGGGGGCT 146306
| | | |||| || ||| | ||||||| || | | |||| | ||| |||||
Sbjct 2066816 GT---CTGAGGGAGTGACATTCCACATGTCGTATTGAAGAATGCCTTGCGACACTGGGCT 2066872
Query 146307 ATTCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCCAGAGC 146366
||||| | |||||| | || | ||| |||||||| || ||| |||||
Sbjct 2066873 GCCTTCGTATGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGC 2066932
Query 146367 CGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTGGCCTCCTCGCTGTCGTA 146426
| | ||| |||||||| ||| | || | ||||||||| |||| |
Sbjct 2066933 AGCATGGTAGATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAA 2066992
Query 146427 GGGGATATCGAGAAGCACAA---AGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGG 146483
|| | | | ||| ||| |||||||||||||||| || | |||| ||| |||||
Sbjct 2066993 AGGAAGAC---GCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGG 2067049
Query 146484 GCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGATGAT 146543
|||||| ||| || ||| || | | || |||| |||| | ||||| ||
Sbjct 2067050 TCGGTGTCGGAAGTTGCTCTTCTTCGCTTCAGGGACAGGGTAGTAGTTGATATCGATAAT 2067109
Query 146544 CTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACATAGTCAAATGT 146603
|||||| || || || |||| | || | || || | | ||||| ||
Sbjct 2067110 CTTGTTTAGGTTGCGAGTCACAACCTGAGTGACCTCATGAAGACGACCGAAGTCATATTC 2067169
Query 146604 ---TTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGC 146660
| || || || |||| | | || || | ||||||| || || || ||
Sbjct 2067170 ACCTCGAGCTTG---GTCGACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGC 2067226
Query 146661 AGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGAT 146720
||| || | || | |||||||| | ||| || ||| || |||| |
Sbjct 2067227 GACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGT 2067286
Query 146721 GCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCC 146780
||||| || || ||||| || | ||||||| ||||||||||||||| || ||
Sbjct 2067287 CCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGT 2067346
Query 146781 CCCGGTTTCGACATTGGTCTCGACGATGAATCTAAACAAA-TCTCTG-GCCTTTACTTGT 146838
||| |||||| | | ||||| ||| | | | || | | |||| |||||||| ||
Sbjct 2067347 CCCAGTTTCGGTCTGTGCCTCGAGGAT--AGCATACCATAGTTTCTGAGCCTTTACA-GT 2067403
Query 146839 CTTTCGTACA-GTTTATTCTTTTCGTATTTCTCGTACA-ATATTTCAAAACTAGA-ACCG 146895
|| || || | | ||| || ||| ||||||| | | || || || | |||
Sbjct 2067404 CTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAA--CTCGTCACCA 2067461
Query 146896 TACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCC 146955
|| ||||| ||||| || || | |||||||| || | |||||||| |||| |
Sbjct 2067462 TAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTC 2067521
Query 146956 TTCACGCGTTCCATAAACAAATCGGGAATCCAAA-GGCCCAGCATCAAGTCGCGAGCCTT 147014
| || |||||||| ||||| || ||| |||| | ||| || | ||||||||| || |
Sbjct 2067522 TCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAA-CAAGTCGCGTGCTCT 2067580
Query 147015 GGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGCCA 147074
| || || ||| ||| ||||| ||| | | ||| | | || | |||||
Sbjct 2067581 AACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCA 2067640
Query 147075 AGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGATCGACGTGGCG 147131
||||| | ||| ||| | || ||| |||||| || ||||||||||||| |||
Sbjct 2067641 TGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACGTAGCG 2067700
Query 147132 CACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGATTT---TGTGGTGCC 147188
| | ||||||||||| || | ||||| | || ||| ||| | |||||||
Sbjct 2067701 AGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTGGTGCC 2067760
Query 147189 ------GTTGTAT--TG-AGCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAG 147239
|| | || || || | | || || | | || || | |||||| |
Sbjct 2067761 TGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCCAGCTGT 2067820
Query 147240 ATTCGAAATCAAAGC-GGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCT 147298
|| || |||| || | || || | ||| | || || || |||||||||||||| |
Sbjct 2067821 CTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCATATATTCCCTCGATGCTGTCTTCTT 2067879
Query 147299 TGATG-CATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGC 147357
| ||| || | || |||||| || ||| ||| || || || || || || ||
Sbjct 2067880 TCATGTCAAT-CAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGG 2067938
Query 147358 GTGGGGCTGGCGTGCGTGAACGTGCCCAGACTCATCA-ATTGATACGTTTCAATGGCGCT 147416
||||| ||||| || || | | ||| | |||| ||||| || ||||| |
Sbjct 2067939 GTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTG-TACGTCTCGATGGCCTT 2067997
Query 147417 CATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTC 147476
|| || |||| |||||| ||| || || ||||| |||||||| ||||| |||||
Sbjct 2067998 TTCAATATCGTCGCTGTGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGCCGTTC 2068057
Query 147477 CGCAATCACGTCATTG---ACTTTTAATAGATATCCATTGGTCAGAGTTTTGAAACCAAA 147533
||| || | |||| | || | || ||| | ||| || |||||||||||
Sbjct 2068058 AGCA---ACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAA 2068114
Query 147534 GTACTTGTAGTCGTAGTCCCTGTTGT 147559
|| | ||||| | |||| | || ||
Sbjct 2068115 ATATTGGTAGTTGAAGTCTCGGTCGT 2068140
>seq1
Length=8230860
Score = 129 bits (142), Expect = 6e-25
Identities = 335/501 (67%), Gaps = 21/501 (4%)
Strand=Plus/Minus
Query 46980 ATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACG---AAGAGAAG 47036
|||||| |||||||||||| ||||||||| || || | || ||| ||||||||
Sbjct 2004780 ATCCACTCGGAAATGTACAGCCTTCTCATTGACACCTATGTAAAGGACCCCAAAGAGAAG 2004721
Query 47037 CAAGCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGG 47096
| || || ||| |||| | || || ||| | |||| || || || |||
Sbjct 2004720 ACATAT---CTGTTCGACGCCATCGACACAATCCCTTGCATTCGCAAGAAAGCAGACTGG 2004664
Query 47097 GCCATGAAGTACATTGAAAACGAAAACGTCACTCTG-GCCGAACGTTTGATCGCTTTCGC 47155
|| || | || | || || | ||| || ||| |||| | | ||||||||
Sbjct 2004663 GCTCTGCGATGGATATCAGACAAAGA-GTCGAGCTTTGCCCAACGACTAGTGGCTTTCGC 2004605
Query 47156 CATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAA 47215
|||||| ||| |||||||||| || |||||| | || || | |||| | |||
Sbjct 2004604 AGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCATCCATCTTCTGGCTGAAGAGCAA 2004545
Query 47216 AGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCA 47275
|||| | |||||||||||||| || ||||||||| ||||| | ||||| ||| ||||
Sbjct 2004544 AGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCA 2004485
Query 47276 CACCAACTTTGCCTGTC-TCTACTACAACA-CTAGAGTCGATCAAAAGTTGGACGTGCCC 47333
||| ||||||| || | | | | ||||| || || || ||| |||| | |
Sbjct 2004484 CACGGACTTTGCGTGCCTTTTGATGCAACATCTGCAG-----CACAAGCCGGAC--CCAC 2004432
Query 47334 ACCGTCAGCG---ACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAG 47390
| | ||| || |||| | ||||||||||| || || | ||| || || ||||
Sbjct 2004431 AAC-TCATCGAAAACATTATAACCGAAGCCGTCAGGATCGAAAAGGAATTCCTCACCGAT 2004373
Query 47391 GCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTT 47450
|| || |||| | | | || |||||| || || | ||| | ||||||| || |||
Sbjct 2004372 GCCCTCCCCGTCGCACTGCTCGGCATGAACTCGAAGCTCATGTGTCAGTACATTGAGTTT 2004313
Query 47451 GTCGCCGACCGCCTGCTCGTT 47471
|| || ||||| |||||| ||
Sbjct 2004312 GTTGCTGACCGTCTGCTCCTT 2004292
>seq7
Length=4110827
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| || || | || || |||||| || | ||| ||| || || || ||||| ||||
Sbjct 1062897 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 1062956
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || || || | ||| || || ||| | |||| |||||||| || |||||
Sbjct 1062957 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 1063016
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| ||| ||| ||||| |||| |||| ||||| | ||||| ||
Sbjct 1063017 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG-TCGATCGTGTCTGAGCTCTCCAC 1063075
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||| ||||| || || || ||||| || || |||||
Sbjct 1063076 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123
Score = 86.0 bits (94), Expect = 6e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| || ||||| || || || || || ||
Sbjct 1063383 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 1063442
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| |||||||| || || || ||||||||||||||| ||| || |||
Sbjct 1063443 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTG 1063502
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | |||||| || | || | || ||||| || || ||
Sbjct 1063503 ACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTC 1063562
Query 127097 TTTACAAAAATCTGCATGGC 127116
|| || || || ||||||||
Sbjct 1063563 TTCACGAAGATTTGCATGGC 1063582
>seq6
Length=4175021
Score = 87.8 bits (96), Expect = 2e-12
Identities = 129/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || || || ||| || || || || || ||| |||||
Sbjct 1383148 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATC 1383089
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
||||||||||| ||||| || ||||| |||||||| ||| || ||||| |||| ||
Sbjct 1383088 AATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTG-TC 1383030
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| ||||| | |||||| || | ||| | || ||||| || || || || || ||
Sbjct 1383029 GATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1382970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499153578480
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