Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 221 1e-52 seq1 84.2 3e-11 >seq2 Length=7068955 Score = 221 bits (244), Expect = 1e-52 Identities = 1115/1745 (64%), Gaps = 45/1745 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATA-TGCATTGAGGA 115616 || ||||||||||| || |||||||| ||| |||||| | | || | ||||| | Sbjct 2066328 CGCAGGTAGTACATGCCGGTCTTGAGACCCATTTTCCAGCC-TGCAAAGTGCATGCTCGT 2066386 Query 115617 CAACTTGGAGAGTGTTGGACTTTCCATGAAGAG---GTTCATACTTTGGGATTGATCGAT 115673 | |||| | ||||| |||| | ||| | ||| | | ||||| || || || Sbjct 2066387 GATCTTGCCCATGGTTGG---TTCCTTCAAGTGAATGTTGAGAGACTGGGACTGGTCAAT 2066443 Query 115674 GAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGT 115733 |||| || || ||||| ||||| | | || | | |||||||||| || || Sbjct 2066444 GAAGGCACCACGGTCCGCTGCCATTTGCAGGACGGTCCGCTGGCTGATTTCCCATACGGT 2066503 Query 115734 TCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGC 115793 |||| || || || || | || | | ||| |||||||| ||||| ||| | Sbjct 2066504 CTTGTATAGAGCTTTGATGTCCGCAGGAACGTTGGGGATGTTTTGGATCGAGCCGCCTTC 2066563 Query 115794 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCAC 115853 || || ||| |||||||| | ||||| || || | | |||||||| || Sbjct 2066564 GGCGATGATCCGATTCTTCATATTGTCGGACCATAGGCCCAAGTCGACGAGATCCTTCAG 2066623 Query 115854 GAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGG 115912 || ||||||||| |||||||| || ||| || | ||| ||||| || | Sbjct 2066624 CAGCCAGGGATTGACAACCTGGAACTCACCGGCAAGGACACGGCG-AGAGTAGATATTAG 2066682 Query 115913 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCA 115972 ||||| || || ||||| || ||||| || | |||||| | || ||||| ||||||| Sbjct 2066683 ATGTGTACGGTTCGAAGCATTCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCA 2066742 Query 115973 TGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGT 116032 |||| || | || || |||||| | ||| ||| | || | ||||| Sbjct 2066743 TGGGAGCAACAAGGAGAGAGTTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGT 2066802 Query 116033 CCCAGTCGTA---GT-TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCT 116088 |||| || | || |||| || | | |||||| || | || || || ||| Sbjct 2066803 CCCAATCCCACAAGTCTGAGGGA-GTGACA---TTCCACATGTCGTATTGAAGAATGCCT 2066858 Query 116089 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 116148 || ||| |||| || || |||| ||||||| |||| ||| |||| ||| | Sbjct 2066859 TGCGACACTGGGCTGCCTTCGTATGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAA 2066918 Query 116149 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TTGCCTTGGC 116207 || ||| || || || || || ||||| || || | ||||| |||||| ||| Sbjct 2066919 GAAGCAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATATTCAATTGCCT-GGC 2066977 Query 116208 CTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 116267 |||| || || || | ||||| | || || | || ||||||||||| || || Sbjct 2066978 CTCGGGAGAGTCGAAAGGAAGACGCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCC 2067037 Query 116268 GAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATT 116327 ||| || | || || |||| | || ||| || || || || | || Sbjct 2067038 GAGACCGACGGGTCGGTGTCGGAAGTTGCTCTTCTTCGCTTCAGGGACAGGGTAGTAGTT 2067097 Query 116328 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 116387 ||||||||| | | ||||| || || ||||||| |||| |||||||| | Sbjct 2067098 GATATCGATAATCTTGTTTAGGTTGCGAGTCACAACCTGAGTGACCTCATGAAGACGACC 2067157 Query 116388 GTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 116444 | | ||| | || |||| ||| | ||| | | || || || | || ||||| Sbjct 2067158 GAAGTCATATTCACCTCGAG---CTTGGTCGACGAATGTCGGGAGAGCCAGGGAGGCCAG 2067214 Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504 ||| ||||||| | |||||| | | ||||| || | ||| || || || | ||| || Sbjct 2067215 ATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGA 2067274 Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564 || ||||| ||||||||||| || || |||| | || || || ||||||||||| Sbjct 2067275 GCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAG 2067334 Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGG 116623 |||||| |||||||| || || || || | || ||| ||||| | ||||| || | | Sbjct 2067335 CATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGC 2067394 Query 116624 CTGGCACAG--TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAA 116681 || |||| ||||| | || ||||||| ||| || | ||| || || | || Sbjct 2067395 CT-TTACAGTCTGGCG--ACCACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAA 2067451 Query 116682 CTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATT 116740 ||| ||| ||| || | || | || || ||||||| || ||||||||||||| ||||| Sbjct 2067452 CTCGTCA-CCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGAGAGTCCATT 2067510 Query 116741 GACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGAT 116800 || ||| || || | |||||| | ||| || |||| | || |||| | | Sbjct 2067511 CTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGT 2067570 Query 116801 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 116860 | || | | | ||||| | || || || | || | ||||||||| | | | Sbjct 2067571 CGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGT 2067630 Query 116861 CCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGT 116917 | |||||||| || || ||||| | || | | || ||| | ||| |||| | Sbjct 2067631 CTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGAT 2067690 Query 116918 TTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGC 116977 || || | || || || || ||||||||||| || || | || | || || Sbjct 2067691 CGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGC 2067750 Query 116978 CATTTGTCCCCCGAATACGAGA-CTTGTTGGCTCTGA--CATCGTGGATGTGCATACCAA 117034 |||| || || ||| || | || |||| | | || | | || || | ||||| Sbjct 2067751 CATTGGTGCCTGCAATGTAGGATCCTG-TGGCACGAATGCAATGGGCAT-TG-AGACCAA 2067807 Query 117035 TACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 117094 |||| || || ||| ||||| || || | |||| || | || || || |||| Sbjct 2067808 TACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGA 2067867 Query 117095 TCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAG 117154 | ||| | || | | || | ||| ||| |||| ||| || || || || | Sbjct 2067868 TGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGG 2067927 Query 117155 CGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTGGGACATCTTATCGTAGGTC 117213 ||||||| ||||| || | |||||| | || || | |||||||| || ||| ||| Sbjct 2067928 CGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTC-TGGGACATGAGATTGTACGTC 2067986 Query 117214 TCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTAT 117273 || | | | ||| || || | ||||||||| | || || ||||||| ||||| | Sbjct 2067987 TCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACACGCATAAGCATGTGT 2068046 Query 117274 TGGGG 117278 ||||| Sbjct 2068047 TGGGG 2068051 >seq1 Length=8230860 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||||||||||| |||||||| || || |||||| || || Sbjct 2004473 GCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 2004532 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| || || |||||| |||||| || | ||| || |||||||||||||| Sbjct 2004533 GGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATG 2004592 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678 || || || ||||| || | ||| || | ||||||| Sbjct 2004593 CCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAG 2004631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505075731320