Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 116 6e-21 >seq1 Length=8230860 Score = 116 bits (128), Expect = 6e-21 Identities = 230/332 (69%), Gaps = 15/332 (5%) Strand=Plus/Plus Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGC 159805 |||| | ||| || ||||| || ||||| |||||| ||| |||| || || ||| Sbjct 2004296 AGCAGACGGTCAGCAACAAACTCAATGTACTGACACATGAGCTTCGAGTTCATGCCGAGC 2004355 Query 159806 AGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 || |||||||| || || | || || ||||| || ||| ||| |||||||| | | Sbjct 2004356 AGTGCGACGGGGAGGGCATCGGTGAGGAATTCCTTTTCGATCCTGACGGCTTCGGTTATA 2004415 Query 159866 ATCTG--CGA-GACACGTTCGTACCCCGGCTTGCCCA--AAATGTGGTCCTTAAACAGGA 159920 || | ||| || || || |||||||| | | |||| | | | ||| | Sbjct 2004416 ATGTTTTCGATGAGTTGTGGGT---CCGGCTTGTGCTGCAGATGTTG-CATCAAA----A 2004467 Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980 ||||||||||||| ||||| |||||||| |||||||||| ||||||||| | | ||| Sbjct 2004468 GGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGA 2004527 Query 159981 GGCCCGGCATGA-TCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAA 160039 |||| ||||| | ||| || || ||||| || |||| ||||| | || || Sbjct 2004528 GGCCGGGCATCAGTCCTTTGC-TCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAG 2004586 Query 160040 AAGATCCCCTCCACGGCCGCAAACGCCACGAG 160071 ||||| || || ||||| || || ||||| || Sbjct 2004587 AAGATGCCTTCGACGGCTGCGAAAGCCACTAG 2004618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152446775120