Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq7 163 3e-35
seq6 125 8e-24
seq5 111 2e-19
seq4 105 8e-18
>seq7
Length=4110827
Score = 163 bits (180), Expect = 3e-35
Identities = 153/192 (80%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| |||||||| || || ||||| |||| || ||||||||||| || ||
Sbjct 1063161 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAG 1063220
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| |||||||||||||| ||| | | ||||||||| |||||| |||||| |||
Sbjct 1063221 ATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTT 1063279
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||||||||||||| || |||| |||||| || ||||| || || || || ||
Sbjct 1063280 GTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTAC 1063339
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 1063340 GAAGATTTGCAT 1063351
Score = 161 bits (178), Expect = 1e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| || |||||| ||||| ||||||||||| || ||||| |||| |||
Sbjct 1063371 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCG 1063430
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| |||||||||||||| |||| |||||||||||| | || | || |||||||||| |
Sbjct 1063431 AGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1063490
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| |||| | | | ||||||||| || || || || | ||||||||| |||
Sbjct 1063491 ATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTG 1063550
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || |||||||||||
Sbjct 1063551 CCAGTAAGTGTCTTCACGAAGATTTGCAT 1063579
Score = 150 bits (166), Expect = 2e-31
Identities = 166/217 (76%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440
|| ||||| ||||| || |||||||| ||||| ||||||||| ||||| ||| ||||
Sbjct 1062911 CAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTC 1062970
Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|| | ||||||||| ||||| |||| ||||||||||| | || | || |||||||||
Sbjct 1062971 CTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 1063030
Query 46501 CATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGA 46556
| ||||||| ||||| ||| | | | |||||| |||| ||||| |||| ||| |
Sbjct 1063031 CTGGATCTTCGACTTGA-CGTTGTCGATCGTGTCTGAGCTC---TCCACCTCCAGCGTAA 1063086
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || ||||| || || || || || |||||||||||
Sbjct 1063087 TCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123
>seq6
Length=4175021
Score = 125 bits (138), Expect = 8e-24
Identities = 139/183 (76%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| ||||| || | || || || |||||||||||||| |
Sbjct 1383150 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGA 1383091
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| ||||||||||||| ||| | || |||||||| |||||| ||||| ||| |
Sbjct 1383090 TCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 1383032
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||| ||| || || || | |||||||| |||||||| || || || ||
Sbjct 1383031 TCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1382972
Query 46583 AAG 46585
|||
Sbjct 1382971 AAG 1382969
>seq5
Length=4609732
Score = 111 bits (122), Expect = 2e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| ||||| |||| || ||||||||||| || ||
Sbjct 1365012 TCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAG 1365071
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| |||||||||||||| | | | ||||||||| ||||| |||||| |
Sbjct 1365072 ATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCTAAATCTTGCTCTTGATGTTG 1365131
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| ||||||||||| || || |||| |||||| || ||| | || || || || |
Sbjct 1365132 TTGATTGTGTCGCTCGACTCAACCTCCAGCGTGATCGTCTTGACAGTAAGTGTCTTCATG 1365191
Query 46583 AAGATTTGCAT 46593
|| || |||||
Sbjct 1365192 AAAATCTGCAT 1365202
Score = 104 bits (114), Expect = 3e-17
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| ||||| | || ||||| ||||||||||||||
Sbjct 1365240 TCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCATCATCGAGTTGCTTGCCGGCGAAG 1365299
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509
|||| ||||||||| |||| ||| | || |||||||||| ||||||
Sbjct 1365300 ATCAGGCGCTGCTGTTCGGGCGGAATGCCCTCCTTGTCCTGGATCTT 1365346
>seq4
Length=6030834
Score = 105 bits (116), Expect = 8e-18
Identities = 97/123 (79%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
|||||| ||||| || | || ||||| ||||| ||||||||||| |||||||| |
Sbjct 3720700 ACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCC 3720641
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| ||||| |||||||||||||| |||| ||| |||||||| | || | || |||||
Sbjct 3720640 GTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGAATGCCTTCCTT 3720581
Query 46498 GTC 46500
|||
Sbjct 3720580 GTC 3720578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565236442862040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |