Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq7 145 8e-30
seq1 141 9e-29
seq6 96.9 3e-15
seq5 96.9 3e-15
seq4 91.5 1e-13
>seq7
Length=4110827
Score = 145 bits (160), Expect = 8e-30
Identities = 174/231 (75%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || || || ||||| || || || | || || ||| | |
Sbjct 1063123 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 1063064
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || || |||| ||||| ||||| ||||| | |||||
Sbjct 1063063 GACACGATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1063005
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||||| |||| ||||||||| ||| |||| |||| ||| || |||| |||||||||
Sbjct 1063004 GCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAA 1062945
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| ||| ||| |||| ||||||||| | || | |||||||
Sbjct 1062944 CATCCAGAAGGAGAGC-ACGTTGCACTTGGTGCTGAGACTGCGTGGCGGCC 1062895
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| |||||||| | || |||||| ||| |
Sbjct 1063579 ATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 1063520
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | ||| || |||| ||||| ||||| || ||| | |||||
Sbjct 1063519 GACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1063460
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| || || || |||| |||||||| ||||||||||
Sbjct 1063459 CAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAAC 1063400
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| |||| ||||| |||| || ||| | | ||||||
Sbjct 1063399 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGTCTCCGTGGCGGC 1063352
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || || || ||||| || ||||| | || || || | | |
Sbjct 1063351 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAGC 1063292
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| || | | | | |||| || |||| ||||| || || || || |||||||
Sbjct 1063291 GACA-CGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCA 1063233
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | |||||||| |||||||| |||| ||||| ||| ||||||||
Sbjct 1063232 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAA 1063173
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| |||||| ||||||| ||| | ||||| ||
Sbjct 1063172 CATCCAGAAGGAATCGACGCTCCATCTCGTGCTCCG 1063137
>seq1
Length=8230860
Score = 141 bits (156), Expect = 9e-29
Identities = 359/536 (67%), Gaps = 19/536 (4%)
Strand=Plus/Plus
Query 132699 CTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT 132758
|||| |||| |||| | | |||||| | ||| || || ||||| ||||| || ||||
Sbjct 2004277 CTTGTTGCC---CAGGGCAAGGAGCAGACGGTCAGCAACAAACTCAATGTACTGACACAT 2004333
Query 132759 G-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCT 132817
| | |||| | || | || ||||| || || || || |||||||| || | |
Sbjct 2004334 GAGCTTCG-AGTTCATGCCGAGCAGTGCGACGGGGAGGGCATCGGTGAGGAATTCCTTTT 2004392
Query 132818 CGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCA 132877
|||| ||| || ||||| | || | | | | | | |||| ||| ||
Sbjct 2004393 CGATCCTGACGGCTTCGGTTATAATGTTTTCGATGAGTTGTGGGTCCGGCTTGTGCTGCA 2004452
Query 132878 AATGCTTGAACATCAA---GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGA 132934
||| ||| |||||| ||| |||||||| |||| ||||||||| | || ||||
Sbjct 2004453 GATG-TTG--CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGA 2004509
Query 132935 GTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG 132994
| |||||| ||| || | ||||||||| || || | || ||||| || |||| |
Sbjct 2004510 GCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATG 2004569
Query 132995 CGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGA 133054
| || || || ||||||| ||| |||||||| ||||||||||| || || | | | |
Sbjct 2004570 CAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAA 2004629
Query 133055 ACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTT--TGACGCA 133112
| | | |||||| | ||||| ||||| ||||| || || |||||| | |||
Sbjct 2004630 AGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTCTGC--TTTCTTGCGAATGCA 2004687
Query 133113 CGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGT 133172
|| || || |||||||||| |||| | ||||||| | | || |||||
Sbjct 2004688 AGGGATTGTGTCGATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGT 2004747
Query 133173 GTCGATGAG--GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| ||||| || | |||||||||||||| | |||||||| || ||||||
Sbjct 2004748 GTCAATGAGAAGGCTG--TACATTTCCGAGTGGATATTCTCCATCATGACTTGAAA 2004801
>seq6
Length=4175021
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| | || |||||| | |||||| |
Sbjct 1382970 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 1383029
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| ||||| || || || || ||||||| ||||| |
Sbjct 1383030 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGATT 1383088
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| ||||| || || || || | || || || | ||||||||||||||| ||
Sbjct 1383089 GATCTTCGCCGGCAAGCAACTTGAAGATGGCCGAACTCTGAGCGACTACAACATCCAGAA 1383148
Query 38432 GG 38433
||
Sbjct 1383149 GG 1383150
>seq5
Length=4609732
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||| | || || || || | ||| || ||||| | || || ||| | | |
Sbjct 1365202 ATGCAGATTTTCATGAAGACACTTACTGTCAAGACGATCACGCTGGAGGTTGAGTCGAGC 1365143
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | ||| | | |||| || || ||||| || || || | |||||||
Sbjct 1365142 GACACAAT-CAACAACATCAAGAGCAAGATTTAGGACAAGGAAGGGATCACATCCGACCA 1365084
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | |||||||| |||||||| |||| |||||| |||||||||
Sbjct 1365083 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCAGGTCCGACTACAA 1365024
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGC 38454
|||||| |||||| ||||||| ||| | ||||
Sbjct 1365023 CATCCAGAAGGAATCGACGCTCCATCTCGTGC 1364992
>seq4
Length=6030834
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| || || |||||| | ||||| || || || || | ||| ||||| || || ||
Sbjct 3720578 GACAAGGAAGGCATTCCCCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 3720637
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| ||||| ||| ||||||||||||||| |||||| |||| || || |||| ||
Sbjct 3720638 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTCCACCTGGTCTTG 3720697
Query 38457 CGT 38459
|||
Sbjct 3720698 CGT 3720700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171068151680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |