Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7 145 8e-30 seq1 141 9e-29 seq6 96.9 3e-15 seq5 96.9 3e-15 seq4 91.5 1e-13 >seq7 Length=4110827 Score = 145 bits (160), Expect = 8e-30 Identities = 174/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| |||||||| || || || ||||| || || || | || || ||| | | Sbjct 1063123 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATTACGCTGGAGGTGGAGAGCTCA 1063064 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || |||| ||||| ||||| ||||| | ||||| Sbjct 1063063 GACACGATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1063005 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||||| |||| ||||||||| ||| |||| |||| ||| || |||| ||||||||| Sbjct 1063004 GCAGCGGCTGATTTTCGCGGGCAAGCAGTTGGAGGACGGGCGGACTCTCAGCGACTACAA 1062945 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| ||| |||| ||||||||| | || | ||||||| Sbjct 1062944 CATCCAGAAGGAGAGC-ACGTTGCACTTGGTGCTGAGACTGCGTGGCGGCC 1062895 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| |||||||| | || |||||| ||| | Sbjct 1063579 ATGCAAATCTTCGTGAAGACACTTACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 1063520 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | ||| || |||| ||||| ||||| || ||| | ||||| Sbjct 1063519 GACACGATCGACAATGTCAAATCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1063460 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| || || || |||| |||||||| |||||||||| Sbjct 1063459 CAGCGCCTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGCACCCTGTCCGACTACAAC 1063400 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| ||||| |||| ||||| |||| || ||| | | |||||| Sbjct 1063399 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGTCTCCGTGGCGGC 1063352 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| |||||||| || || || ||||| || ||||| | || || || | | | Sbjct 1063351 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAGC 1063292 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || |||| ||||| || || || || ||||||| Sbjct 1063291 GACA-CGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCA 1063233 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | |||||||| |||||||| |||| ||||| ||| |||||||| Sbjct 1063232 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAA 1063173 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| |||||| ||||||| ||| | ||||| || Sbjct 1063172 CATCCAGAAGGAATCGACGCTCCATCTCGTGCTCCG 1063137 >seq1 Length=8230860 Score = 141 bits (156), Expect = 9e-29 Identities = 359/536 (67%), Gaps = 19/536 (4%) Strand=Plus/Plus Query 132699 CTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT 132758 |||| |||| |||| | | |||||| | ||| || || ||||| ||||| || |||| Sbjct 2004277 CTTGTTGCC---CAGGGCAAGGAGCAGACGGTCAGCAACAAACTCAATGTACTGACACAT 2004333 Query 132759 G-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCT 132817 | | |||| | || | || ||||| || || || || |||||||| || | | Sbjct 2004334 GAGCTTCG-AGTTCATGCCGAGCAGTGCGACGGGGAGGGCATCGGTGAGGAATTCCTTTT 2004392 Query 132818 CGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCA 132877 |||| ||| || ||||| | || | | | | | | |||| ||| || Sbjct 2004393 CGATCCTGACGGCTTCGGTTATAATGTTTTCGATGAGTTGTGGGTCCGGCTTGTGCTGCA 2004452 Query 132878 AATGCTTGAACATCAA---GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGA 132934 ||| ||| |||||| ||| |||||||| |||| ||||||||| | || |||| Sbjct 2004453 GATG-TTG--CATCAAAAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGA 2004509 Query 132935 GTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG 132994 | |||||| ||| || | ||||||||| || || | || ||||| || |||| | Sbjct 2004510 GCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATG 2004569 Query 132995 CGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGA 133054 | || || || ||||||| ||| |||||||| ||||||||||| || || | | | | Sbjct 2004570 CAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAA 2004629 Query 133055 ACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTT--TGACGCA 133112 | | | |||||| | ||||| ||||| ||||| || || |||||| | ||| Sbjct 2004630 AGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTCTGC--TTTCTTGCGAATGCA 2004687 Query 133113 CGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGT 133172 || || || |||||||||| |||| | ||||||| | | || ||||| Sbjct 2004688 AGGGATTGTGTCGATGGCGTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGT 2004747 Query 133173 GTCGATGAG--GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| ||||| || | |||||||||||||| | |||||||| || |||||| Sbjct 2004748 GTCAATGAGAAGGCTG--TACATTTCCGAGTGGATATTCTCCATCATGACTTGAAA 2004801 >seq6 Length=4175021 Score = 96.9 bits (106), Expect = 3e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| | || |||||| | |||||| | Sbjct 1382970 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGACACGATC 1383029 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| || || || || ||||||| ||||| | Sbjct 1383030 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAAGGCATCCCGCCCGACCAGCAGCGATT 1383088 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| || || || || | || || || | ||||||||||||||| || Sbjct 1383089 GATCTTCGCCGGCAAGCAACTTGAAGATGGCCGAACTCTGAGCGACTACAACATCCAGAA 1383148 Query 38432 GG 38433 || Sbjct 1383149 GG 1383150 >seq5 Length=4609732 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||| | || || || || | ||| || ||||| | || || ||| | | | Sbjct 1365202 ATGCAGATTTTCATGAAGACACTTACTGTCAAGACGATCACGCTGGAGGTTGAGTCGAGC 1365143 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | ||| | | |||| || || ||||| || || || | ||||||| Sbjct 1365142 GACACAAT-CAACAACATCAAGAGCAAGATTTAGGACAAGGAAGGGATCACATCCGACCA 1365084 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | |||||||| |||||||| |||| |||||| ||||||||| Sbjct 1365083 GCAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCAGGTCCGACTACAA 1365024 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGC 38454 |||||| |||||| ||||||| ||| | |||| Sbjct 1365023 CATCCAGAAGGAATCGACGCTCCATCTCGTGC 1364992 >seq4 Length=6030834 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || || |||||| | ||||| || || || || | ||| ||||| || || || Sbjct 3720578 GACAAGGAAGGCATTCCCCCGGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 3720637 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| ||||| ||| ||||||||||||||| |||||| |||| || || |||| || Sbjct 3720638 GACGGCCGCACTCTCTCCGACTACAACATCCAGAAGGAATCGACCCTCCACCTGGTCTTG 3720697 Query 38457 CGT 38459 ||| Sbjct 3720698 CGT 3720700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171068151680