Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq9 109 2e-18 >seq9 Length=194725 Score = 109 bits (120), Expect = 2e-18 Identities = 240/355 (68%), Gaps = 6/355 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||||| || | |||||||| || ||||| ||| || || ||| Sbjct 128519 CTCCCGAAGAAATCTCCGCCATGGTTCTAGGCAAGATGAAGGAAGTTGCGGAGGCATACC 128460 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || |||||| | ||||| | || || || || || ||||| || || || | Sbjct 128459 TGGGCAAGAAAGTTACCCACGCAGTTGTCACGGTCCCGGCATACTTCAACGACGCTCAGC 128400 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || |||||||| || ||| |||||||| | |||||| || || | || | Sbjct 128399 GACAAGCTACCAAAGATGCTGGTACTATCGCTGGTTTGACTGTTCTGCGTGTTGTGAACG 128340 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 | || || || || ||| | || ||||| || ||| || ||| || |||| | Sbjct 128339 AGCCAACTGCCGCAGCTATCGCCTATGGCCT-GGACAAG---AAGGG-CA-AAGAGAGCC 128286 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | || | || | ||| ||||||| || || ||| ||| | ||||||||||||| Sbjct 128285 AGATCATTGTCTACGATCTTGGTGGTGGTACATTCGATGTTTCCCTTCTTTCAATTGAAG 128226 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 |||| || || || || ||| ||| ||||| |||||||| || || ||||| Sbjct 128225 ATGGCGTTTTCGAGGTCCTGGCCACCGCCGGTGACACTCATCTTGGTGGCGAAGA 128171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975711388051916