Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 480 1e-130 seq7 199 5e-46 seq9 158 2e-33 seq4 84.2 3e-11 >seq3 Length=6051644 Score = 480 bits (532), Expect = 1e-130 Identities = 1046/1556 (67%), Gaps = 21/1556 (1%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || || ||||| || || | | ||||| || || || || |||||| | || || Sbjct 1414708 TCGATCTCTTCCTTGGACAGACGACCCTTGTCGTTGGTGATGACAATCTTGTTCGACTTG 1414767 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | |||| || | ||| || |||| || || || ||||||| |||||| | Sbjct 1414768 CCAGTGCCCTTCTCGACGGCAGAGACGTTCATGATTCCGTTGGCATCAAGATCGAATGTG 1414827 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | || || || ||| | || || | |||||||| | | || || | ||| Sbjct 1414828 ACCTCGATCTGGGGAACACCACGGGGAGCAGGGGGAATACCGGAAAGTTCGAACTTGCCA 1414887 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | |||| ||| | | ||| ||||| || ||||||| ||| ||| || Sbjct 1414888 AGCAGGTTGTTGTCCTTGGTGCGAGCACGCTCACCCTCGTAGACTTGAATAAGCACACCA 1414947 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || || || || || |||||| | | ||||| | || || || || || Sbjct 1414948 GGCTGGTTGTCAGAGAAGGTGGAGAAGGTCTCGGACTTCTTGGTGGGGATGGTGGTGTTG 1415007 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | | || | || ||||| | |||||| ||| |||| || || ||||| || | Sbjct 1415008 CGCTTGATGAGAGGAGTCATGACACCACCAGCAGTCTCGATACCGAGGGACAGTGGCGCG 1415067 Query 6971 ACGTCCAAGAGTAACAGGTC-TTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGC 7026 || |||||||| || | || ||| | || | | | ||||| | | ||| || Sbjct 1415068 ACATCCAAGAGCAAGATCTCGTTGGTC-GACTTGGACGAGGTGTCACCAGACAGGATAGC 1415126 Query 7027 GGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTC 7086 ||||||||| | || ||||| ||||| |||||||||||||| || | ||| || | || Sbjct 1415127 GGCTTGGACGGCAGCACCGTAGGCGACGGCCTCATCGGGGTTGATTGATTTGTTGGGCTC 1415186 Query 7087 TTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACC 7146 || ||||| || | || || | | | || ||| | ||||| || || || ||||| Sbjct 1415187 CTTGCCGTTGAAGAAGTCGGAAACAAGCTTCTGGATTCTGGGGATACGGGTGGAACCACC 1415246 Query 7147 GACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTC 7206 |||||| |||||||| | || || || |||||||| | || || || || Sbjct 1415247 GACCAAGACGATTTCGTGAACGGAAGACTTGTCGATCTTGGCATCACGCAGGACACGCTC 1415306 Query 7207 GACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGT 7266 ||||| |||||| ||||| | ||| || || || || ||||| || ||||| Sbjct 1415307 CACAGGCTCCATAGTAGATCGGAAGAGATCCTGGCAGAGCTCTTCGAAACGGGCTCGGGT 1415366 Query 7267 AATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGC 7326 || || || ||||| || | ||| ||||| | ||||| ||||| || | || ||||| Sbjct 1415367 GATCGAGGTGTAGAAGTCGATGCCTTCGTAGAGGGAATCGATTTCGATAGAGGTCTGTGC 1415426 Query 7327 CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386 | ||| || | || ||||| || |||||||| || ||||| | |||||| || || || Sbjct 1415427 AGACGAGGACAGGGTGCGCTTGGCACGCTCACAGGCAGTTCGGAGACGACGCAGAGCCCG 1415486 Query 7387 CGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA- 7444 | || | | | |||||| ||| || ||||| || || | | ||||| || || Sbjct 1415487 AGCATTGCTGCTCAAGTCTTTCCGATGCTTGCGTTTGAATTCGTTAACGAAGTGGTTGAC 1415546 Query 7445 AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACT 7504 | || | | ||||| ||||||||||||||||| || || || || || | |||||| Sbjct 1415547 AAGACGGTTG--TCGAAGTCTTCACCACCCAAGTGAGTGTCGCCGGCAGTGGACTTGACT 1415604 Query 7505 TCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCA 7564 || |||||||| | |||||| | || | |||||||| || ||||||||||| || || Sbjct 1415605 TCGAAGATACCCTCCTCAATGGTCAAGAGAGAAACATCGAAAGTACCACCACCAAGATCG 1415664 Query 7565 AAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCC 7624 || ||||| || || || | || ||||| ||||||||||| || || || || Sbjct 1415665 AAGATGAGGACATTGCGCTCACCCTCAGCCTTCTTGTCGAGACCGTAGGCAATGGCGGCA 1415724 Query 7625 GCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTC 7684 || || ||||| || || ||||| || ||| ||||| || || | ||||| || Sbjct 1415725 GCAGTGGGTTCGTTGATGATACGGAGGACGTTGAGGCCTGCGATCAGACCAGCATCCTTG 1415784 Query 7685 GTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACT 7744 || ||||| || || || ||||| |||||||| ||||| || | ||| |||| ||||| Sbjct 1415785 GTAGCTTGGCGCTGAGAGTCGTTGAAGTAGGCAGGGACAGTAATGACTGCGTTGTTGACT 1415844 Query 7745 TTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATC 7804 | |||||| || || ||||| | ||| |||| ||||| | ||||| || || ||| Sbjct 1415845 GTGCCACCGAGGTATGACTCCGCAGTCTCTCTCATCTTGGTCAAGACCATGGAGGAGATC 1415904 Query 7805 TCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCC 7864 ||||| | | ||||| ||| |||||| || || || || | || | || || Sbjct 1415905 TCTTCGGGTGTGAACTGCTTCTCTTCACCTTTGAACTCCACCTGGATGACTGGCTT---- 1415960 Query 7865 GCAGCACC---GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG 7921 || |||| | || ||||| | | | | ||||| ||| ||||||| | Sbjct 1415961 GC--CACCCTTGTCAATGACCTTGAAGGGGAAGTGCTTCATGTCGGCTTGGACTTCGGCA 1416018 Query 7922 TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATG 7981 || || || | || || || ||||| || ||||| || ||||| | |||||||| Sbjct 1416019 TCGCTGAATTTCCGACCAATCAGTCGCTTGGCGTCAAAGACGGTGTTGTGAGGGTTCATC 1416078 Query 7982 GCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACG 8041 || ||||||||| || || || || || ||||| || | || || || || ||| Sbjct 1416079 GCGACTTGGTTCTTTGCGGCATCACCAATCAGACGCTC---TGTGTCGGTGAAAGCAACG 1416135 Query 8042 TACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGC 8101 |||| || || ||||| || || |||||||| |||||||| || | |||||| | | | Sbjct 1416136 AACGAGGGAGTGGTTCGGTTGCCCTGGTCGTTGGCAATAATCTCGATGCGGTCATCTCGG 1416195 Query 8102 CAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 ||||||| || ||||| || ||||| |||| ||| ||||| || ||| | | ||| Sbjct 1416196 AAGACGCCTACACACGAGTAGGTTGTACCTAGATCGATACCAATGGCTGGTGCCAT 1416251 >seq7 Length=4110827 Score = 199 bits (220), Expect = 5e-46 Identities = 359/518 (69%), Gaps = 9/518 (2%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || |||||||| || |||||||| |||| | || ||| || |||||||| | ||||| Sbjct 2871275 AGATCCTCAAATCGGGCACGGGTGATGGTAGCATTGAAGTCCTCGCCGTCGAACAACGAG 2871216 Query 7304 TCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 |||||||||| || | || | |||| || || |||| |||||| || || || | Sbjct 2871215 TCAATTTCAACCGTGGCCTGGGTTCCGTTC--GACAAGGTTCTCTTTGCACGTTCGCAGG 2871158 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421 | || || | || ||||||||||| | || ||| || | || ||||| || | Sbjct 2871157 CGGTGCGGAGTCGTCGAAGGGCACGGGCGTCACCAGACAAGTCCTTCTTGGTCTTCCTCG 2871098 Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 | ||||| | ||| || |||| |||| | | || || |||| ||||||||| || Sbjct 2871097 TGAACTCCTTCTTGAAATGCTCGA-GGAGGTTGGTGTCAAAGTCTTGACCACCCAAATGG 2871039 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 ||||| || || || || ||||| |||| ||| || | ||||| |||| ||||||| Sbjct 2871038 GTATCTCCAGCAGTAGCCTTGACCGTGAAGACACCACCCTGGATGTTCAACAGCGAAACA 2870979 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT--TTGTTCT 7598 || || ||||||||||| ||||| | ||||| ||||| || | |||| || | Sbjct 2870978 TCGAATGTACCACCACCAAGGTCGTAGATGAGGACGTTTCGCTCCTTGTCTGATTTGCCG 2870919 Query 7599 TAT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 || | |||||||| ||||| || || || || ||||| || || ||||| || ||| Sbjct 2870918 GATCCAAGACCGTAGGCGATGGCGGCGGCGGTGGGTTCGTTGATGATACGGAGGACGTTG 2870859 Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 ||||| | ||| | | ||||| || || |||||||| || || || || || || Sbjct 2870858 AGGCCGGAAATGGCACCGGCATCCTTGGTAGCTTGTCGCTGGTTGTCATTGAAATAAGCA 2870799 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || || || | ||| || | | || ||||| || || Sbjct 2870798 GGCACGGTGATGACGGCCTTGGAAACCTTCTTGCCCAG 2870761 >seq9 Length=194725 Score = 158 bits (174), Expect = 2e-33 Identities = 254/358 (71%), Gaps = 13/358 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||| ||||| | || || || || ||||| || ||| || || | || Sbjct 128165 TCGAAGTCTTCGCCACCAAGATGAGTGTCACCGGCGGTGGCCAGGACCTCGAAAACGCCA 128224 Query 7517 CCTTCAATGTTTAACAACG-AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 ||||||| | || || | ||||||| || ||||||||||| || || | || | Sbjct 128225 TCTTCAAT-TGAAAGAAGGGAAACATCGAATGTACCACCACCAAGATCGTA---GACAAT 128280 Query 7576 GTTCGTATCGTCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | || | | |||||| ||||| || || || || |||||||| || || ||||| Sbjct 128281 GATC---TGGCTCTCTTTGCCCTTCTTGTCCAGGCCATAGGCGATAGCTGCGGCAGTTGG 128337 Query 7633 TTCATTAATAATACGAAGA-CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || || | || ||| ||| |||| || ||||| ||||| | |||||||| || |||| Sbjct 128338 CTCGTTCACAACACGCAGAACAGT-CAAACCAGCGATAGTACCAGCATCTTTGGTAGCTT 128396 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 |||| || | ||||| ||||| ||||||||||| || || |||| || |||||||| | Sbjct 128397 GTCGCTGAGCGTCGTTGAAGTATGCCGGGACCGTGACAACTGCGTGGGTAACTTTCTTGC 128456 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 | || || | ||||| | || ||||| ||| |||||||| | || || ||||| Sbjct 128457 CCAGGTATGCCTCCGCAACTTCCTTCATCTTGCCTAGAACCATGGCGGAGATTTCTTC 128514 Score = 96.9 bits (106), Expect = 4e-15 Identities = 236/358 (66%), Gaps = 0/358 (0%) Strand=Plus/Plus Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 ||||| || ||||| || || ||| ||| || || |||| | | || || |||| Sbjct 127349 CCCTTGTCGTTCGTGATGGTGATCGATTCAGACTTGCCCGTGCCTTTGTCGCCAGCCGAG 127408 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 || || | |||||| ||||| || | ||||| || | ||| || || ||| | Sbjct 127409 ACCTTGAGAATACCGTTTGCGTCGAGTTCGAAAGACACTTCAATCTGAGGAACACCACGA 127468 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 || |||| |||||||| || | || ||| | || || | |||| ||| | | | | Sbjct 127469 GGGGCGGGAGGAATACCGGTCAGTTCGAATTTGCCCAGAAGGTTGTTGTCCTTGGTCATT 127528 Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874 ||||| |||||| | || | || || | ||||| ||||| ||||| ||| Sbjct 127529 GCTCGTTCGCCTTCAAAAACCTGGATCAGTACTACGGGTTGGTTATCCGCAGCCGTAGAG 127588 Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATA 6934 |||||||| |||||| | || | | || |||| ||||| | |||||| | Sbjct 127589 AAGATTTGGGATTTCTTGGTCGGTACCAGTGTGTTTCGGGGAATGAGTTTGGTCATGACT 127648 Query 6935 CCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTT 6992 ||||| ||||||| | || |||| |||||| | || |||| ||| | ||||||| Sbjct 127649 CCACCGGTAGTTTCAATGCCGAGAGTCAGAGGATTGACATCCATGAGAATAAGGTCTT 127706 >seq4 Length=6030834 Score = 84.2 bits (92), Expect = 3e-11 Identities = 192/282 (68%), Gaps = 9/282 (3%) Strand=Plus/Minus Query 11367 GAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTCACGCTCATCGTTTGCCGC 11426 ||| ||||||||||| || || | |||||| | ||| ||| |||||||| || ||| | Sbjct 362323 GAAGCCATCCATTTCGGTCAAAATTTGGTTGAGTGTCGATTCCCGCTCATCATT-GCCAC 362265 Query 11427 AAACCCATTCATACTTC----TTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAA 11482 | | | | | ||| || ||| ||||| ||||||||||| || || ||||| | Sbjct 362264 CACCAAAGTTTTGTTTCGCCCTTGACTTGCCAATGGCATCAATTTCGTCAATGAAGATGA 362205 Query 11483 TACACGGTTGATTTTCACGTGCCAAT-TCAAATATATCACGGACTCTTTTTGCGCCTACG 11541 | ||||| ||| | | || || | |||| | || || |||| || ||| || Sbjct 362204 TGCACGGCGCATTCTTTC-TGGCATTGGCAAACAGGTCCCGCACTCGAGATGGGCCGACA 362146 Query 11542 CCTACAAACATTTCAACGAACGATGACCCCGAACACTGA-ATAAAAGGAACGGAAGATTC 11600 || ||||||||||| ||||| || || | | ||||| | || |||||| ||||| Sbjct 362145 CCGACAAACATTTCGACGAATTCGGAACCAG-AGACTGAGAAGAAGGGAACGCCGGATTC 362087 Query 11601 ACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGG 11642 ||| || | || || || || || ||||| ||||| || Sbjct 362086 ACCAGCGGTCGCCTTGGCCAACAGCGTCTTACCAGTACCCGG 362045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130600852680