Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 123 3e-23 >seq1 Length=8230860 Score = 123 bits (136), Expect = 3e-23 Identities = 186/259 (72%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 102078 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 ||||||| | || || || |||||| | ||| | || || |||| |||||||| || Sbjct 2004726 GAGAAGACATATCTGTTCGACGCCATCGACACAATCCCTTGCATTCGCAAGAAAGCAGAC 2004667 Query 102138 TGGGCTATGAAGTGGTT-TGATACAAAG--TCGCGTTCCTTTGCTGAGCGACTCTTCGCA 102194 |||||| || ||| | | | |||||| ||| | |||||| | ||||| | || Sbjct 2004666 TGGGCTCTGCGATGGATATCAGACAAAGAGTCGAG---CTTTGCCCAACGACTAGTGGCT 2004610 Query 102195 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAA 102253 || || || || || |||||||||||||| ||||| ||| | || | ||||| || Sbjct 2004609 TTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTT-TGCATCCATCTTCTGGCTGAA 2004551 Query 102254 GAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || ||| || ||||| || ||| ||||||||||||||| ||||||||||||||||| Sbjct 2004550 GAGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGG 2004491 Query 102314 ACTCCACCAAGAGTTTGCG 102332 | ||| || |||||| Sbjct 2004490 CATGCACACGGACTTTGCG 2004472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740250679440