Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 185 1e-41 seq1 87.8 2e-12 >seq2 Length=7068955 Score = 185 bits (204), Expect = 1e-41 Identities = 1053/1660 (63%), Gaps = 65/1660 (4%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 ||||| ||||| || ||||| |||||| || || ||||| | | || | ||| Sbjct 2066427 GACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCATTTGCAGGACGGTCCGCTGG 2066486 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626 || |||||||| || |||||||| | | ||||| || | |||| || ||||||| Sbjct 2066487 CTGATTTCCCATACGGTCTTGTATAGAGCTTTGATGTCCGCAGGAACGTTGGGGATGTTT 2066546 Query 109627 TGAATAGAGCCACCAGCCTTCACC-ATGA---GATCCTTCATCTCTTTCGACCAGAGACC 109682 || || ||||| |||||| | |||| ||| |||||| | | ||||| || || Sbjct 2066547 TGGATCGAGCC----GCCTTCGGCGATGATCCGATTCTTCATATTGTCGGACCATAGGCC 2066602 Query 109683 GACCTTTTTGAGATCGT-CAACAAGATGCTTG---TTGACCACGACAAATTCACCAGCAA 109738 | | |||||| | || || || | ||||| || || ||||| |||| Sbjct 2066603 CAAGTCGACGAGATCCTTCAGCA----GCCAGGGATTGACAACCTGGAACTCACCGGCAA 2066658 Query 109739 GTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGA 109798 | || || |||||| |||| ||||| |||||||| || || |||||||| |||| Sbjct 2066659 GGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCATTCGTTGTTGCCGAGGA 2066718 Query 109799 TTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC--CTT 109856 |||| | ||| || || |||||||||||||| | || ||| ||| || | ||| || Sbjct 2066719 TTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTGCGAATACCATGTT 2066778 Query 109857 CGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTA--GTCTCA 109914 | | | | ||| || ||||||||||| |||| | | | | | | Sbjct 2066779 TGGCAATCTCGGCT--TTCAAGGCGTCCCAATC-------CCACAAGTCTGAGGGAGTGA 2066829 Query 109915 CCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCG 109974 ||| |||||| || |||||| | || | | | || || | | | | || Sbjct 2066830 -CATTCCACATGTCGTATTGAAGAATGCCTTGCGACACTGGGCTGCCTTCGTATGTTTCA 2066888 Query 109975 TACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTC 110034 || | |||| ||| |||| || | ||||| || || ||||| || || ||| Sbjct 2066889 TATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTAGATGGTC 2066948 Query 110035 TCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG- 110093 || || || || ||||| | | | ||| | ||||||| |||||| | || | Sbjct 2066949 TCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAGGAAGA-CGCAGCGC 2067007 Query 110094 AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGA 110153 || || | || || ||||| ||||| |||||||| | ||| || || | ||| | Sbjct 2067008 AAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAGTT-GC 2067066 Query 110154 GCGTCGAGCAGTTTC---TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTT 110210 | || | ||| || ||||| ||||| ||||| | | || || || Sbjct 2067067 TCTTC--TTCGCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGTTGCG 2067124 Query 110211 CGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAA--CGTTTTCGTCTC---C 110265 |||||| || |||| ||||| | | || | |||| | | ||| ||| | Sbjct 2067125 AGTCACAACCTGAGTGACCTCATGAA----GACG--ACCGAAGTCATATTCACCTCGAGC 2067178 Query 110266 TT-ATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTT 110324 || | ||| || | |||||||| | || || ||||||||||||| ||| || Sbjct 2067179 TTGGTCGACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCATCGGG 2067238 Query 110325 GTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTT 110384 | |||||||| | ||| || || || | ||||| || ||| ||||||||||| Sbjct 2067239 AGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGTTCTT 2067298 Query 110385 CTGATT-CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCG 110443 ||| || | ||| | ||||| || ||||| |||||||| || || || |||||||| | Sbjct 2067299 CTGGTTGCTCTTTCTA-TTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGG 2067357 Query 110444 TCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGAC 110503 |||||| || ||| || || | ||||| | || ||||| | | | | | Sbjct 2067358 TCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACAGTCTGGCGACCACGGC 2067417 Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGAC 110563 | |||| ||| || | ||| | | | || || | || || || || | ||| | Sbjct 2067418 CCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGGCAAGGC 2067477 Query 110564 CCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGA 110623 | |||| | ||||||||||| | ||| | | || ||| || | | ||||| Sbjct 2067478 CAGGTGCCTCATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGA 2067537 Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683 ||| ||||||| ||||||| || |||| | ||| || | | ||||||| | || | Sbjct 2067538 ACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGT 2067597 Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743 |||| | || | ||||||||| | | || | ||||||||| ||||| |||| | Sbjct 2067598 GGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGG 2067657 Query 110744 CGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797 | | | || |||| | || |||| | || ||||| || || ||||| Sbjct 2067658 CAAAAGCACCTGGGCGCTTATTGCCAC---CCTGATCGACGTAGCGAGCAGTATTATTGA 2067714 Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857 |||| | ||||| || |||| || | ||| ||||| || || ||| ||| Sbjct 2067715 AGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTGGTGCCTGCAATGTAGGATC 2067774 Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917 ||||||||||| ||| || | ||||||||| || || ||| || | Sbjct 2067775 CTGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCCAGCTGTCTTGGAGATCATGG 2067834 Query 110918 CAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976 ||| | ||| |||| || |||| || || || || ||| | || || |||| | Sbjct 2067835 CACAAGTCT-TGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAG 2067893 Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036 || || || |||| ||||| |||| ||||| || ||||| || || || | || || Sbjct 2067894 AAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGG 2067953 Query 111037 ATGAA-CAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACC 111095 | || || | |||||||| ||||| || |||| || | ||| | | Sbjct 2067954 GTAAAGCACTTC-TGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCT 2068012 Query 111096 GTGAATACCAATGGCAACTCGCATGAACATATATTGAGGC 111135 ||||||||| | || || ||||| | ||| | ||| ||| Sbjct 2068013 GTGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGC 2068052 >seq1 Length=8230860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/228 (70%), Gaps = 11/228 (5%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || |||||||||||||| || |||| || || ||||| |||||| | || Sbjct 2004491 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 2004550 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| ||| |||||| ||||||||||| || || |||||| Sbjct 2004551 TTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCGAAA 2004610 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGAC-TTGTC---GAACCACTTGAGAGCCCAGTT 119689 || | ||| || | || |||| |||| | ||||| | ||| |||||||||| Sbjct 2004611 GCCACTAGTCGTTGGGC-AAAGCTCGACTCTTTGTCTGATATCCATCGCAGAGCCCAGTC 2004669 Query 119690 GGC---CTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 || ||| || ||||| |||| || | |||||| ||||| || Sbjct 2004670 TGCTTTCTTGCG---AATGCAAGGGATTGTGTCGATGGCGTCGAACAG 2004714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973960670600