Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 118 1e-21 >seq2 Length=7068955 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 153216 GGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTAGT 153275 ||||||||||| || | ||| || || || || | ||||| |||| || |||||| Sbjct 5939218 GGATACTATGGGACAACTACGCCACCGGTGATCACGAGAAACATTCTGGAAAATCCTGCC 5939159 Query 153276 TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTA 153335 |||||||| |||||| || ||||| |||||||| |||||| | ||||| | | Sbjct 5939158 TGGTACACCAGTTACACCCCGTATCAGGCTGAGATCAGTCAGGGTCGCTTGGAGTCGCTG 5939099 Query 153336 TTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTA 153395 || |||| |||||| || | || || || ||||| | | ||||| || |||||| | Sbjct 5939098 TTGAATTTCCAAACCCTTGTGACCGATCTCACAGGTCTCGCCATAGCTAATGCATCTGTC 5939039 Query 153396 TTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 | ||||||| ||||| || || ||||||||| Sbjct 5939038 CTTGATGAAGGCACTGCTGCTGCTGAAGCAATG 5939006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210794475680