Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2 123 2e-23 >seq2 Length=7068955 Score = 123 bits (136), Expect = 2e-23 Identities = 225/325 (69%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 30064 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC-CACGGCGTTTTGCAGCTGATC 30122 ||||| |||||||| | ||| ||| || ||| | || ||| | | || | ||| || Sbjct 5086306 ATGATCCGCCTGTCGTATGGATTGGTCTTGA-GTTTTCGCACCACCTCTTTGATCTGGTC 5086248 Query 30123 CACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCA 30182 ||| || | |||| |||||||| |||| ||||||||||||||||||| | ||| Sbjct 5086247 CACTCCTTTGCCCGTGTAGTCTGTATGGCAGTCCTTGTACTCTGCTCCGAAATGGCGCCA 5086188 Query 30183 CTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTC 30242 || || ||||| || || || || ||||| || || | || |||| ||| |||||| Sbjct 5086187 TTGAAATCCGTAGACAGGGCCGAGATCTCCTTCCTCGCGGTCAACGAATCCCAACTTGTC 5086128 Query 30243 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT--TTACCCCCTTCTCGGAGAGCTCT 30300 | || |||| || ||||| |||||||||| | | || ||||| ||||| Sbjct 5086127 GAGGAATTCTCGCGAGCCGTTCCCGTCCCAGATGTGGATGCCTGCTTCT--GAGAGAGGC 5086070 Query 30301 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30360 || || | ||| | ||| ||||||||||||||||| |||||| |||| Sbjct 5086069 TTCGATGTCGTGCAGCCTGATACGAACCACAGCAGCTCGGTGGTGACGGCTCGTAGAAAG 5086010 Query 30361 ACCCTCTTGGTCGTGAGGAGGGGAA 30385 || | || || ||||||||||||| Sbjct 5086009 ACGCGTTTAGTGGTGAGGAGGGGAA 5085985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616220532521