Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 187 5e-42 seq1 114 2e-20 >seq2 Length=7068955 Score = 187 bits (206), Expect = 5e-42 Identities = 1184/1860 (64%), Gaps = 92/1860 (5%) Strand=Plus/Plus Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCAT- 212635 || ||| | ||||| || ||||||||||||||||| || ||| | |||||| |||| Sbjct 2066316 GCCGCCATCGTGCGCAGGTAGTACATGCCGGTCTTGAGACCCATTTTCCAGCC-TGCAAA 2066374 Query 212636 GTGCATTGCT-GTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTA 212694 |||||| ||| |||| |||| | | | |||| |||| || || | Sbjct 2066375 GTGCAT-GCTCGTGA---TCTTGCCCATGGT----TGGT--TCCTT------CAAGTGAA 2066418 Query 212695 GGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATAT 212754 ||| || ||||| |||||| ||||| | | | ||| || ||||| | | || Sbjct 2066419 TGTTGAGAGACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCATTTGCAGGACGG 2066478 Query 212755 CTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGG 212814 | |||| || ||||| ||||||||| | | |||||| |||| | || | | || Sbjct 2066479 TCCGCTGGCTGATTTCCCATACGGTCTTGTATAGAGCTTTGATGTCCGCAGGAACGTTGG 2066538 Query 212815 GGATGTTCTGCACAGACCC-CCTGTGT--ATGGTCAGCTGCAGGCGCATGTCCTCGTTCC 212871 ||||||| || | || || ||| | ||| || | | | ||| | ||| || Sbjct 2066539 GGATGTTTTGGATCGAGCCGCCTTCGGCGATGATCCGATTCTT---CATATTGTCGGACC 2066595 Query 212872 AGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 | |||||| | | || ||| | ||| || ||||| | |||||| ||||| | Sbjct 2066596 ATAGGCCCAAGTCGACGAGATCCTTCAGCAGCCAGGGATTGACAACCTGGAACTCACCGG 2066655 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 || || | | ||| | || || ||||| || |||| || |||||||| || | Sbjct 2066656 CAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCATTCGTTGTTGCCGA 2066715 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 | || || | ||| ||| |||||||||||||| || |||||| ||| | | || | Sbjct 2066716 GGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTGCGAATACCAT 2066775 Query 213052 GCTCGCCGATGA-GGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCC 213110 | | | | || ||| ||| | |||| ||||| || ||| | Sbjct 2066776 GTTTGGCAATCTCGGCTTTCAAGGCGT-CCCAATCCCA---------CAAGTCTGAGGGA 2066825 Query 213111 TTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAG 213170 | || ||||||||||| | || | ||||||| ||| |||||||| | ||| | Sbjct 2066826 GTGACATTCCACATGTCGTATTGAAGAATGCCTTGCGACACTGGGCTGCCTTCGTATGTT 2066885 Query 213171 GAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATG 213230 || | || |||||||| ||||| || || || || || ||||| | ||||||| Sbjct 2066886 TCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTAGATG 2066945 Query 213231 GTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATG 213290 || || || || | | || | | | ||||||| || || ||| || | || | Sbjct 2066946 GTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAGGAAGACGCA-G 2067004 Query 213291 CGTT-GGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 || |||| | || || || || || || |||| |||| ||||| ||||| | ||| Sbjct 2067005 CGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAGTT 2067064 Query 213350 AGACTTGGAGCACTCCTCCAAGG----GGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405 ||| | || || || |||| ||||| ||||| |||||||| |||| Sbjct 2067065 GCTCTT----CTTCGCTTCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGT 2067120 Query 213406 TGCGGGTGGCCACTTTGGTGAC---ATG--GGCCAG-GTACTCGTGATTGAACACGTAGC 213459 |||| || | || | ||||| ||| | | | | | || | ||| | | || ||| Sbjct 2067121 TGCGAGTCACAACCTGAGTGACCTCATGAAGACGACCGAAGTCAT-ATTCACCTCG-AGC 2067178 Query 213460 CCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT 213519 ||| || || || || || | | |||||| ||||| || || ||||| | Sbjct 2067179 TTG-GTCG---ACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCAT 2067234 Query 213520 -GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | ||| | ||||| || | ||||| ||||| || ||| || ||||||||| |||| | Sbjct 2067235 CGGGAGCC-GTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAG 2067293 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| |||| ||| | |||||||||||||| ||||| | ||| || Sbjct 2067294 TTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTT 2067353 Query 213639 TCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACA 213698 || ||| | | | || || ||| || | | ||||| || | ||| | Sbjct 2067354 TCGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACA----GTCTGGCG 2067409 Query 213699 GCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCT 213757 | ||| | | ||| || ||||| || ||||||| |||| || |||| Sbjct 2067410 ACCACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTC 2067469 Query 213758 GTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACT 213815 | | || || || | ||| || ||| | ||| |||| || || | |||| ||| Sbjct 2067470 GGCAAGGCCAGGTGCCTCATGAGG-ACAGAAGAGAGTCCATTCTTGGTTCTTCTC-GACA 2067527 Query 213816 CTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCG 213875 | | |||||||| ||| || ||||| ||| ||||| ||| | | || ||| Sbjct 2067528 CGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCT 2067587 Query 213876 TCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCC 213935 ||| || ||| || | ||| | | |||||| || | ||| |||||||| ||||| Sbjct 2067588 TCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCG 2067647 Query 213936 ATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC-CAGCCTGGCCAC 213991 | |||||||||||| || || | || | ||||| ||||| || || ||| | || Sbjct 2067648 AGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACGTAGC--GAGCAG 2067705 Query 213992 CA-TGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTA 214050 | | ||||||| ||| || | ||| | ||||||||||| || ||||| || || | Sbjct 2067706 TATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTGGTGCCTGCAA 2067765 Query 214051 TATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTT 214108 | || || || | ||| | | | || ||| |||| || || || || || ||| Sbjct 2067766 TGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGA--CCAATACCTCCAGCTGTCTT 2067823 Query 214109 GGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAG 214168 |||||||||||| || | | | || || || || | |||||||| ||| | | Sbjct 2067824 GGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCAT 2067883 Query 214169 GTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG--CCAGAGTTGAAAAGCGTG 214226 || | |||||| ||| || || || || | || | | || | ||||||||| ||| Sbjct 2067884 GTCAATCAAGAAACAGGAGGACAGTTGAGG--TTGAGGGGTTCCGGCGTTGAAAAGGGTG 2067941 Query 214227 GGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGG 214286 || || ||| | | |||| | || | ||| |||| ||||| | | | Sbjct 2067942 GGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGGCCTTTTCA 2068001 Query 214287 ATGTCGTGCTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTAT 214345 || |||| |||| || | || ||| | ||| |||||||| ||||||| || Sbjct 2068002 ATATCGTCGCTGTGAATACCCACTGC-CACACGCATAAGCATGTGTTGGGGCCGTTC--- 2068057 Query 214346 GGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 | ||| ||| |||||||||||| || | |||||| |||||||| ||||| || Sbjct 2068058 AGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATA 2068117 >seq1 Length=8230860 Score = 114 bits (126), Expect = 2e-20 Identities = 223/327 (68%), Gaps = 12/327 (4%) Strand=Plus/Plus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| ||||||||| |||||| ||| ||||| || ||||||| ||||||||||| ||| Sbjct 2004469 GCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 2004528 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||| | || | || |||||||| || | || || || ||||||||||| Sbjct 2004529 GCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAA 2004588 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 |||||| || || || ||||| || || | | | || | | |||||||| Sbjct 2004589 GATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGA 2004648 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||| || ||||||||||| ||||| ||||| || || || || ||||| Sbjct 2004649 TATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTC 2004708 Query 48370 GAAGAGCT---TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGC 48423 ||| || | |||| ||| | |||| |||||||| | |||| || | Sbjct 2004709 GAACAGATATGTCTT---CTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCT--- 2004762 Query 48424 GTACATCTCAGAGTGCACATTCTCTAT 48450 |||||| || ||||| | |||||| || Sbjct 2004763 GTACATTTCCGAGTGGATATTCTCCAT 2004789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931529574567680