Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 219 8e-52 seq1 93.3 8e-14 >seq2 Length=7068955 Score = 219 bits (242), Expect = 8e-52 Identities = 803/1240 (65%), Gaps = 33/1240 (3%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 || || ||||| |||||||||||||| ||||| | || | | | ||||||||||| Sbjct 2066925 GTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGA 2066984 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || ||| || | ||||||| | ||| ||||||| || || || ||||||| |||| Sbjct 2066985 GAGTCGAAAGGAAGACGCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCG 2067044 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 | ||| | ||||| |||| |||||| || || || || |||||| ||| Sbjct 2067045 ACGGGTCGGTGTCGGAAGTTGCTCTTCTTCGCTTCAGGGACAGGGTAGTAGTTGATATCG 2067104 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 || | ||||| ||||| |||| | || | | ||||| || || | Sbjct 2067105 ATAATCTTGTTTAGGTTGCGAGTCACAACCTGAGTGACCTCATGAAGAC------GACCG 2067158 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 || | | || || | | ||| || || || | || || | | |||| Sbjct 2067159 AAGTCATATTCACCTCGAGCTTGG------TCGACGAATGTCGGGAGAGCCAGGGAGGCC 2067212 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 || || ||||| || ||||| || || || | | ||||| || || || ||| Sbjct 2067213 AGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTG 2067272 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836 || ||||||||||| || || || || ||| | |||| |||||||||||| Sbjct 2067273 GAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAG 2067332 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG 221896 |||||| |||| ||||| || ||| ||| | || || | ||| |||| |||| Sbjct 2067333 AGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATAGTT-TCTG 2067391 Query 221897 -GCGCTCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCG--GTATAGAGCAT 221952 || | || ||| | ||| | ||||| ||| ||||| | ||||||||| Sbjct 2067392 AGCCTTTACAGTC-TGGCGACCACGGCCCTC---CTTCTCATATCTCTCGTATAGAGC-- 2067445 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCG-GGACACATCAGAC 222011 || |||| ||||| || | ||| | ||||| || ||| | ||||| | ||| Sbjct 2067446 GTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTG-CCTCATGAGGACAGAAGAGAG 2067504 Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071 |||| | | ||| | | ||| | | |||||| | ||| || |||||| || | | Sbjct 2067505 TCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAGA 2067564 Query 222072 AGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTC 222129 | | || | || | || ||| ||| ||||| ||| || ||||| | |||||| || Sbjct 2067565 ACAAGTCGC--GTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTC 2067622 Query 222130 AAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCC 222189 || | ||| |||||||| ||||| || |||| ||| | ||| || || ||||| ||||| Sbjct 2067623 GAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCC 2067682 Query 222190 ACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTT 222249 ||||||||| || | | | ||||||| |||||| | || | || ||||| Sbjct 2067683 ACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTT 2067742 Query 222250 GGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACAT 222309 ||| || |||||||| |||||| | || ||| | | | | |||| | Sbjct 2067743 GGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAG 2067802 Query 222310 GCCGATACCACCGGCGTGT-TTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368 || ||||| || || ||| || ||||||||||| || ||||||| ||||| || | Sbjct 2067803 ACCAATACCTCCAGC-TGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTC 2067861 Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGG 222428 |||| || ||| || || | || | || ||||| || |||| |||| || | || Sbjct 2067862 CCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGG 2067921 Query 222429 AACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGT 222488 | |||||| || || ||||| ||||| |||||| | | ||||| |||| || Sbjct 2067922 TTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGT 2067981 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCA-TGGCGCATCTCATGTAC 222547 ||||||| | | | | | || | ||| | |||||| || || | || | ||| | Sbjct 2067982 ACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACA-CGCATAAGC 2068040 Query 222548 ATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGA 222607 |||| ||||||| || || ||| | ||||||||| ||| | ||||| Sbjct 2068041 ATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGC 2068100 Query 222608 GTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGT 222647 |||||||| ||||| || | | || ||||||| | ||| Sbjct 2068101 GTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGT 2068140 >seq1 Length=8230860 Score = 93.3 bits (102), Expect = 8e-14 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| | | || || || || || || || || || |||||||| ||| || || ||| Sbjct 2004630 TTTGCCCAACGACTAGTGGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTT 2004571 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGA 25988 || ||||||||||||| ||| || | |||| |||||||| || ||| |||||||| Sbjct 2004570 GCATCCATCTTCTGGCTGAAG-AGCAAAGGACTGATGCCCGGCCTCACCTTCTCCAACGA 2004512 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033 ||||||| | |||||||| | |||| || ||||| ||||| Sbjct 2004511 GCTCATCTCTCGTGACGAGGGCATGCACACGGACTTTGCGTGCCT 2004467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841583874880