Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 120 9e-22 >seq2 Length=7068955 Score = 120 bits (132), Expect = 9e-22 Identities = 342/522 (66%), Gaps = 13/522 (2%) Strand=Plus/Plus Query 155629 TGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGT 155688 ||||||| ||||||||| ||| || || || || |||||| || || |||||||||| Sbjct 2067244 TGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGT 2067303 Query 155689 TAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTG 155748 | || || || || || |||||||| || || || || || || || || |||||| Sbjct 2067304 TGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTG 2067363 Query 155749 CGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCG 155808 | || || || ||| || | | || || | || | | ||| ||| Sbjct 2067364 CCTCGAGGATAGCATACCATAGTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCT 2067423 Query 155809 ACTCATATTTCA--TATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG 155866 ||||||| || |||| |||||| | | || ||||| || || || ||||| Sbjct 2067424 TCTCATATCTCTCGTATAGAGCGTT--GAACTCGTCACCATAGACGTCGGCAAGGCCAGG 2067481 Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTT---TATTACCGATTACACGCTCCATAAA 155923 || || || || || || | ||| || | || ||| |||| ||||| || Sbjct 2067482 TGCCTCATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGA---CACGTTCCATGAA 2067538 Query 155924 TACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTG 155983 | ||| | ||| || || ||||| | ||| | ||| | ||| || | |||||| Sbjct 2067539 CAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTG 2067598 Query 155984 ATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGC 156043 ||||| | || | || || || | || | || |||||| || || || || Sbjct 2067599 GTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGC 2067658 Query 156044 AAAACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGAC 156100 |||| ||| | ||| |||||||||||| || || |||||||| ||||||||||| Sbjct 2067659 AAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGAC 2067718 Query 156101 ACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 | ||||| || |||| || ||||| ||||||||||| || Sbjct 2067719 GCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTGGTGCC 2067760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471812376427349