Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 147 2e-30
seq7 104 2e-17
seq5 82.4 7e-11
>seq2
Length=7068955
Score = 147 bits (162), Expect = 2e-30
Identities = 570/872 (65%), Gaps = 33/872 (4%)
Strand=Plus/Plus
Query 139084 GAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACAC 139143
||||| | |||||||| || || || ||||| | ||||||||||||| || | ||
Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266
Query 139144 AAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCT 139203
| ||| | ||| || || || || | || ||||| |||| || || || ||
Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326
Query 139204 TTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTTGAACA- 139261
||||| |||||||| || || |||||||| |||| ||| | || | || | ||
Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCAT---ACCAT 2067383
Query 139262 AGTCCCT-AGCTTGTA---TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAG 139317
||| || ||| | || | || || | | | | || ||| || | |||||
Sbjct 2067384 AGTTTCTGAGCCTTTACAGTCTGGCGACC---ACGGCCCTCCTTCTCATATCTCTCGTAT 2067440
Query 139318 AGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACAT 139376
|| ||| ||| |||| |||| ||| |||| | ||| | | || | |||||| |
Sbjct 2067441 AGAGCGTTGAACTCGT-CACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAA 2067499
Query 139377 GAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGC 139436
||| | |||| | |||| || ||| || |||||||| || ||| |||||| ||
Sbjct 2067500 GAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGC 2067559
Query 139437 GAACAGCAAATCGCGCGCCTTCTTA--TCTTCCGAACCCATGTTACGTTTCATGTTAAGG 139494
| | | ||| ||||| || ||| | |||||| || ||| | ||| ||| |
Sbjct 2067560 GTAGAACAAGTCGCGTGC--TCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAA 2067617
Query 139495 AAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---T 139551
|| || || ||||| ||||||||||| || || |||||||| | || ||| ||
Sbjct 2067618 AAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTA 2067677
Query 139552 TTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGA 139611
|||||||| |||||||||| || ||| ||||||||| ||||| | ||| || ||
Sbjct 2067678 TTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGC 2067737
Query 139612 CCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGACTGTTGCGAGCTCGGACGTCATGTA 139669
||| | | || || ||||||| ||| ||| | || | || || | | |||
Sbjct 2067738 CCGTTGGAGGTGCCATTGGTGCCTGCAATGTAGGA-TCCTGTG-GCACGAATGCAATGGG 2067795
Query 139670 CATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCG 139728
|||||| || || || || | ||||| || | | ||| || | | || ||
Sbjct 2067796 CATTGAGACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCA 2067854
Query 139729 TATATACCTCTTATGCTGTCGTCCTGCATCGTGA--CCAGAAAGCATGACGAAAGTTGCG 139786
||||| || |||||||| || | ||| || | | ||||| || || || ||||| |
Sbjct 2067855 TATATTCCCTCGATGCTGTCTTCTTTCAT-GTCAATCAAGAAA-CAGGAGGACAGTTGAG 2067912
Query 139787 GTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGAC 139845
|| | || ||||| || || || || ||||| || || || || | |||
Sbjct 2067913 GTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTT-CTGGGAC 2067971
Query 139846 ATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACT 139905
|| | | |||||| |||||||| | ||||||| | ||| ||||| || | ||
Sbjct 2067972 ATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACA 2068031
Query 139906 CGCATCAGCATATGTTGGATCCGTTCGGCCAC 139937
||||| ||||| |||||| |||||| || ||
Sbjct 2068032 CGCATAAGCATGTGTTGGGGCCGTTCAGCAAC 2068063
>seq7
Length=4110827
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || || || || || ||||| || || ||| | | |
Sbjct 1063351 ATGCAAATCTTCGTAAAGACACTTACTGGCAAGACGATCACGCTGGAGGTTGAATCGAGC 1063292
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || ||||| ||
Sbjct 1063291 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGGATCCCGCCCGACCAG 1063232
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || ||||||||||| | | | || || || |||
Sbjct 1063231 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 1063172
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||||||||| || || | ||| | || | ||||| ||
Sbjct 1063171 ATCCAGAAGGAATCGACGCTCCATCTCGTGCTCCGGCTCCGCGGCGG 1063125
>seq5
Length=4609732
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || || || || || || | || || || ||||| || || || | | |
Sbjct 1365202 ATGCAGATTTTCATGAAGACACTTACTGTCAAGACGATCACGCTGGAGGTTGAGTCGAGC 1365143
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | | | | || ||||| | ||||| ||||| || | |||| ||
Sbjct 1365142 GACACAATCAACAACATCAAGAGCAAGATTTAGGACAAGGAAGGGATCACATCCGACCAG 1365083
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || ||||||||||| | | || ||| || || |||
Sbjct 1365082 CAGCGCCTGATCTTTGCGGGCAAGCAGCTGGAGGACGGCCGCACCAGGTCCGACTACAAC 1365023
Query 24884 ATTCAAAAGGAATCGACACTACA 24906
|| || ||||||||||| || ||
Sbjct 1365022 ATCCAGAAGGAATCGACGCTCCA 1365000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896042229560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |