Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 1e-15
seq197 96.9 5e-14
seq4 96.9 5e-14
seq2 89.7 8e-12
>seq1
Length=8230860
Score = 102 bits (112), Expect = 1e-15
Identities = 216/311 (69%), Gaps = 21/311 (7%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| ||| ||| | |||||| ||| |||||||||||| || || ||
Sbjct 2004491 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGTCCTTTGCTC 2004550
Query 794401 TTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC- 794456
|| ||||| ||||||| || || | | | ||||| |||||||| |||||||| ||
Sbjct 2004551 TTCAGCCAGAAGATGGATGCAAAGGATC---CAGAGAAGAAGATGCCTTCGACGGCTGCG 2004607
Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT-TGAT--CCACTTCAT 794513
|||||| || || || | |||||| | | | |||||||| |||| ||| ||
Sbjct 2004608 AAAGCC-ACTAGTCGTTGGGCAAAGCT--CGA----CTCTTTGTCTGATATCCATCGCAG 2004660
Query 794514 CGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAA-AGAGGTGG 794571
||||| ||||| || || | | | || | |||||||||||| |||| ||| ||
Sbjct 2004661 AGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTCGAACAGATATG- 2004719
Query 794572 TCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGG 794631
|||||| |||||||| || |||||||| ||||| || ||| | || ||||||
Sbjct 2004720 -TCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACATTTCCGAGTGG 2004778
Query 794632 ATGTTTTCGAT 794642
|| || || ||
Sbjct 2004779 ATATTCTCCAT 2004789
>seq197
Length=2309
Score = 96.9 bits (106), Expect = 5e-14
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 2035641 ATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700
||||| || ||||| || |||||||| ||||| | | ||| || |||||||||||
Sbjct 991 ATCCTGGCGGCCAATTATCTCGACATTAAGCCTTTGTTGGATACCGGATGCAAGACCGTC 932
Query 2035701 GCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTAC 2035760
||||| | |||||||| ||||||||||| || |||||| | || || || |||||| ||
Sbjct 931 GCCAATATGATCAAGGGGAAGTCGCCCGAAGAAATCCGCCAAACGTTCAATATCAAGAAC 872
Query 2035761 G 2035761
|
Sbjct 871 G 871
>seq4
Length=6030834
Score = 96.9 bits (106), Expect = 5e-14
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673
||||||||| | || || ||| | || || || || ||||| ||||| ||||| |
Sbjct 2262980 GTCGACCAAGAAATGCTTTTCGAGATCATTCTGGCGGCAAACTATCTCGATATCAAAGCT 2262921
Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733
| || ||| | || |||||||| || |||||| | ||||||||||||||||| |||||
Sbjct 2262920 TTGCTGGATGTCGGCTGCAAGACTGTCGCCAACATGATCAAGGGCAAGTCGCCGGAGGAG 2262861
Query 2035734 ATCCGCAAGACCTTTAACATC 2035754
|| || ||||| || || |||
Sbjct 2262860 ATACGTAAGACGTTCAATATC 2262840
Score = 91.5 bits (100), Expect = 2e-12
Identities = 126/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||| ||||| ||||||||||||||||| || ||||||||| |||| ||||| || |||
Sbjct 4903038 GTATTTGGTCACGGCCTTGGTACCCTCGGACACGGCGTGCTTGGCGAGTTCACCAGGCAG 4903097
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || | |||| || |||||||| |||| | ||| ||| |||||| || |
Sbjct 4903098 GATGAGTCTGACGGATGTTTGGATCTCTCGGGAGGAGATTGTGGACTTCTTGTT-GTAGG 4903156
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACG 1485643
| || || | ||| |||||| ||| || |||| ||||| |||||||
Sbjct 4903157 CAGCAAGCTTGGAGGCTTCGGTGGCGACACGCTCGAAGATGTCTGAAACAAACG 4903210
>seq2
Length=7068955
Score = 89.7 bits (98), Expect = 8e-12
Identities = 277/432 (64%), Gaps = 12/432 (3%)
Strand=Plus/Plus
Query 2071578 GACGACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTG 2071635
||| | ||| ||||| || |||| | ||| |||| |||| ||||| |||||||||
Sbjct 2067251 GACAATCTCAGTGCAAAGATTGGAG--CTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTC 2067308
Query 2071636 GTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTG 2071695
| ||| ||||||||||| ||||| ||||||| || || ||| |||| ||| |
Sbjct 2067309 TTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCG 2067368
Query 2071696 ACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCTCGCG----CGGCCCTNNNN 2071751
| ||| || |||| | || | || || | || ||| |||||||
Sbjct 2067369 AGGATAGCATACCATAGTTTCTGAGCCTTTACAGT----CTGGCGACCACGGCCCTCCTT 2067424
Query 2071752 NNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGC 2071811
| || |||| || || | || | | ||| ||||| || ||
Sbjct 2067425 CTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGC 2067484
Query 2071812 CTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTC 2071871
||| || || ||||| | ||| || | || | || || ||| |||| |||
Sbjct 2067485 CTCATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTC 2067544
Query 2071872 GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTT 2071931
||||||| | |||| || | ||||| || | ||| |||||||||||||||||
Sbjct 2067545 AGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTT 2067604
Query 2071932 TTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGC 2071991
| |||||| | |||||| | ||| |||||||| ||||| |||||| |||||| ||
Sbjct 2067605 TCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGC 2067664
Query 2071992 GCCCTTGCGCTT 2072003
|| ||||||
Sbjct 2067665 ACCTGGGCGCTT 2067676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916216934246603
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |