Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 188 7e-43
seq1 125 7e-24
seq7 123 2e-23
seq6 105 6e-18
seq5 96.9 3e-15
>seq2
Length=7068955
Score = 188 bits (208), Expect = 7e-43
Identities = 1116/1757 (64%), Gaps = 59/1757 (3%)
Strand=Plus/Plus
Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GTCGCTTTA 148110
|||||| |||||||||||| || |||||||| || ||||||| | || ||| | |
Sbjct 2066427 GACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCATTTGCAGGACGGTC-CGCTG 2066485
Query 148111 TCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGC 148170
| | || ||||| | |||||||| || ||||| | | |||| | | ||||
Sbjct 2066486 GC-TGATTTCCCATACGGTCTTGTATAGAGCTTTGATGTCCGCAGGAACGTTGGGGATGT 2066544
Query 148171 GCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGA 148230
|| | |||||||| | || | ||| |||| ||| | ||| | ||||| |
Sbjct 2066545 TTTGGATCGAGCCGCCTTCGGCGATGATCCGATTCTTCATATTGTCGGACCATAGGCCCA 2066604
Query 148231 GCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGC 148290
|||| || || | | ||| | |||| || ||||| ||||| ||||| || || |
Sbjct 2066605 AGTCGACGAGATCCTTCAGCAGCCAGGGATTGACAACCTGGAACTCACCGGCAAGGACAC 2066664
Query 148291 GCCGCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349
| || ||| || | || || ||||||| || | ||||||||||| | || ||
Sbjct 2066665 GGCG-AGAGTAGATATTAGATGTGTACGGTTCGAAGCATTCGTTGTTGCCGAGGATTTGA 2066723
Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409
| |||| || ||||||||| || || || || |||||||| | ||| | ||
Sbjct 2066724 GAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTGCGAATACCATGTTTGGCA 2066783
Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469
|| | | |||| || |||| ||||| | || || || || ||||||||||||
Sbjct 2066784 ATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAGGGAGTGACATTCCACATGTCG 2066843
Query 148470 TACTGCAGAATGCC--GCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCG 148527
|| || |||||||| ||| | | |||||||| ||||| | || | ||| |||
Sbjct 2066844 TATTGAAGAATGCCTTGCGAC--ACTGGGCTGCCTTCGTATGTTTCATATGTTCCCTGCT 2066901
Query 148528 CCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587
|| |||||||| || || ||| || | | ||| || |||||| |||||
Sbjct 2066902 CCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGA 2066961
Query 148588 TGTTGAGCAGCGCCGCCGACTCG---CTTTCGTACGGCATACGCAGCCGCACAAACGCGT 148644
| || | | ||| | |||| ||| | || | ||||||| | || ||||
Sbjct 2066962 TATTCA--ATTGCC-TGGCCTCGGGAGAGTCGAAAGGAAGACGCAGCGCAAGGAAGGCGT 2067018
Query 148645 CGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGC 148704
|||| || || || || || | || | ||| |||||| | |||| |||
Sbjct 2067019 CGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGAAGTTGCTCTTCTTCGCTT 2067078
Query 148705 TCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTG 148764
|| || |||| |||| ||||| ||||||| || ||||| ||| |||| |
Sbjct 2067079 CAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTAGGTTGCGAGTCACAACCTGAG 2067138
Query 148765 TAA--TTCTG--------CGCAG-CA-ATTCAAAATCGTACTTGTCATCTACG-ATGCAT 148811
| | | || || || || |||| | ||| |||| || ||| ||| |
Sbjct 2067139 TGACCTCATGAAGACGACCGAAGTCATATTC-ACCTCGAGCTTG--GTCGACGAATG--T 2067193
Query 148812 CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCT 148871
||| | || | ||||| ||||||||||| || |||||| || || |||| ||
Sbjct 2067194 CGG--GAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCG 2067251
Query 148872 ACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTG 148931
|| ||||| | ||| |||||| || | ||| |||| |||||| || ||||||||
Sbjct 2067252 ACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTT 2067311
Query 148932 CTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCA-- 148989
|| ||||| ||||||||||| ||||| || || |||||||| ||| | || |
Sbjct 2067312 CTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGG 2067371
Query 148990 CTATGAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGT 149049
|| | | || || | ||| || || ||| || ||||||| ||| |
Sbjct 2067372 ATAGCATACCAT--AGTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCAT 2067429
Query 149050 A--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTT 149107
| | ||||| ||| | |||| | || || ||| ||| | || || || ||
Sbjct 2067430 ATCTCTCGTATAGAGC--GTTGAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTC 2067487
Query 149108 GTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGG 149167
|| || || | ||| | ||| | || | | || || | ||| |||| || ||
Sbjct 2067488 ATGAGGACAGAAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGG 2067547
Query 149168 CACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCG 149227
||| | ||||| | | |||||| || | ||||| ||| ||| |
Sbjct 2067548 AGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCT 2067607
Query 149228 CAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC 149287
|||||| | | | ||| | ||| |||||||| ||||| | ||| | || | || ||
Sbjct 2067608 CAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACC 2067667
Query 149288 CTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCAT 149344
|||| ||||| ||||| ||||||| ||| | | || || || || |||| |||
Sbjct 2067668 TGGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCAT 2067727
Query 149345 AGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGA--CTGCCGCGCGCTC 149400
|| || || ||| ||||| || || |||| || ||| || ||
Sbjct 2067728 GGGGATAAGCCCGTTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAAT 2067787
Query 149401 GCACTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTC 149458
||| || ||| |||| || || || || || || ||| ||||| || | ||||
Sbjct 2067788 GCA--ATGGGCA--TTGAGACCAATACCTCCAGCTGT-CTTGGAGATCATGGCACAAGTC 2067842
Query 149459 GCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518
||| || || || |||||||||||||| |||||| | || || || ||
Sbjct 2067843 -TTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGA 2067901
Query 149519 GCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA 149578
| ||| ||| || | | || ||||| ||| | |||||| ||||| ||||| |
Sbjct 2067902 GGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCA 2067961
Query 149579 TTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCC 149638
|||||| ||| | | ||||| ||||| | || || || |||| || || ||
Sbjct 2067962 CTTCTGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACC 2068021
Query 149639 TATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAG 149698
| || || ||||| ||||| || || || || || || |||| || ||||| |||||
Sbjct 2068022 CACTGCCACACGCATAAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAG 2068081
Query 149699 CAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTG 149758
|| ||| | || || |||||| | ||||| || | ||||| ||||| ||| |||
Sbjct 2068082 CAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTA 2068141
Query 149759 GTCAATGGCGGCGTCGA 149775
| |||| || | || ||
Sbjct 2068142 GACAATTGCAGAGTTGA 2068158
>seq1
Length=8230860
Score = 125 bits (138), Expect = 7e-24
Identities = 278/411 (68%), Gaps = 21/411 (5%)
Strand=Plus/Plus
Query 120465 GAGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAG 120524
|||||| ||||| || |||||||||||||||| |||||| || || ||||||||| ||
Sbjct 2004295 GAGCAGACGGTCAGCAACAAACTCAATGTACTGACACATGAGCTTCGAGTTCATGCCGAG 2004354
Query 120525 CAACGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAA 120584
|| || || || | || |||| || ||||| || || || || || | |
Sbjct 2004355 CAGTGCGACGGGGAGGGCATCGGTGAGGAATTCCTTTTCGATCCTGACGGCTTCGGTTAT 2004414
Query 120585 CATGG---CGAGCA-TAGTGTGGCCGGGCATCTTGTGTTC--GATGCGCGTTCGGTAGTA 120638
||| ||| | | ||| | |||| |||||| | |||| || |
Sbjct 2004415 AATGTTTTCGATGAGTTGTGGGTCCGG----CTTGTGCTGCAGATGTTGCATCA-----A 2004465
Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698
|||||||||||||||||||||| ||||||||| || || || ||||||||| || ||
Sbjct 2004466 AAGGCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGT 2004525
Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758
||||||||||| | ||||| |||| | |||| |||| |||||| || || ||
Sbjct 2004526 GAGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAA 2004585
Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818
||| | ||| || ||| || || || || | || | ||| || ||| | |||| |
Sbjct 2004586 GAAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGAC-TCTT--T 2004642
Query 120819 GTC---GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866
||| ||||| || ||||| || || || ||||| | ||| || ||
Sbjct 2004643 GTCTGATATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGAT 2004693
>seq7
Length=4110827
Score = 123 bits (136), Expect = 2e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| ||||| ||||| || ||||| ||| || ||| ||| ||||| ||||||||
Sbjct 1063382 GGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCC 1063441
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || |||||||| |||||||| |||||| ||
Sbjct 1063442 GGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTT 1063501
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | ||||||| ||| ||| || || | |||| ||| ||||| || || ||
Sbjct 1063502 GACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGT 1063561
Query 133643 TTTTACGAAAATCTGCATGGC 133663
|| ||||| || ||||||||
Sbjct 1063562 CTTCACGAAGATTTGCATGGC 1063582
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528
||| ||||| || ||||| |||| | || | |||||| | ||||||||||||| |
Sbjct 1062932 CTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAA 1062991
Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588
||| |||||||||||||| ||||| ||||| |||||||| |||||| ||||| |
Sbjct 1062992 AATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTT 1063051
Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648
|| | |||||| | | |||||| || | || | || ||||| || || || |||||
Sbjct 1063052 GTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTAC 1063111
Query 133649 GAAAATCTGCAT 133660
||| || |||||
Sbjct 1063112 GAAGATTTGCAT 1063123
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| || || ||||| || ||||| || | |||| |||||| ||||||||||||
Sbjct 1063155 GTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTGCCC 1063214
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || || |||||||||||||| ||||| ||||||||||| |||||| ||||
Sbjct 1063215 GCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTTGCTCTTG 1063274
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||||| | | || || || | |||| || ||||| || || ||
Sbjct 1063275 ACGTTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTTGCCAGTAAGTGTC 1063334
Query 133644 TTTACGAAAATCTGCATG 133661
|||||||| || ||||||
Sbjct 1063335 TTTACGAAGATTTGCATG 1063352
>seq6
Length=4175021
Score = 105 bits (116), Expect = 6e-18
Identities = 133/180 (74%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| |||| || || | | | || || || |||||||| ||| | ||
Sbjct 1383148 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCA-TCTTCAAGTTGCTTGCCGGCGAAGAT 1383090
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
| |||||||||||||| ||||||||||||||||| |||||| ||||| | ||
Sbjct 1383089 CAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTC 1383030
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| |||||||| | ||| || || | ||||| ||| ||||| || || || || |||||
Sbjct 1383029 GATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1382970
>seq5
Length=4609732
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| || || ||||| || ||||| ||| | | ||| |||||| ||||||||||||
Sbjct 1365006 GTCGATTCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCGTCCTCCAGCTGCTTGCCC 1365065
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
|| | || || ||||||||||||| | ||| ||||||||||| ||||| ||||
Sbjct 1365066 GCAAAGATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCTAAATCTTGCTCTTG 1365125
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | | | |||||| | | ||| || || | |||| || ||| | || || ||
Sbjct 1365126 ATGTTGTTGATTGTGTCGCTCGACTCAACCTCCAGCGTGATCGTCTTGACAGTAAGTGTC 1365185
Query 133644 TTTACGAAAATCTGCATG 133661
|| | |||||||||||||
Sbjct 1365186 TTCATGAAAATCTGCATG 1365203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419126155480
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