Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 163 3e-35 >seq2 Length=7068955 Score = 163 bits (180), Expect = 3e-35 Identities = 608/943 (64%), Gaps = 19/943 (2%) Strand=Plus/Plus Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCAC 147525 || ||||||||||| || || ||| |||| | |||| | || || || | ||| Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266 Query 147526 AGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCT 147585 || ||| || | ||| ||||| || | ||| ||||| || | |||||| ||||| Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326 Query 147586 TTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA--AACCTATGCA 147643 ||| ||||||| || || || || ||| || | || | |||| | | || | Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCAT--A 2067384 Query 147644 GGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACA-AC 147702 | | ||| || || ||| ||| |||||||| || || || | |||||| | | Sbjct 2067385 GTTTCTGAGCCTTTACAGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGAG 2067444 Query 147703 CGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGC 147762 || | || |||||| || ||| ||||||||||| || || ||| ||||| | || Sbjct 2067445 CGTTGAA-CTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGAGA 2067503 Query 147763 GACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTAC 147822 | ||| | || | | || ||| ||| |||| || || ||||| ||||| Sbjct 2067504 GTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGTAG 2067563 Query 147823 ATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTA 147882 | | ||||| ||| | || || ||| ||| | ||| || | | | Sbjct 2067564 AACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCG 2067623 Query 147883 TAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCG 147939 | | ||| |||||||| || || | ||||| ||| | |||||| ||||| || Sbjct 2067624 AACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCA 2067683 Query 147940 CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTC 147999 ||||| ||||| | ||| | | || || || ||||| | |||||| || ||| | Sbjct 2067684 CCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTG 2067743 Query 148000 GCAGTGCCGTTGGTGG----AATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTT 148055 | ||||| |||||| ||| | | ||| || | ||| | | ||| || Sbjct 2067744 GAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAAT--GGGCA--TT 2067799 Query 148056 AACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGA 148114 | ||||| || || || || ||| || || || ||| | || || | Sbjct 2067800 GAGACCAATACCTCCAGCTGT-CTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATA 2067858 Query 148115 TGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCC 148174 | || ||||||||||| | ||| | | ||| ||| ||||| || ||| ||| || Sbjct 2067859 TTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAG 2067918 Query 148175 GCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGC 148234 | ||||| || |||||||||||| ||||| ||||| | || || ||| | Sbjct 2067919 GGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGAT 2067978 Query 148235 GATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGA 148294 |||||||| || || | ||| || ||||||| |||||| |||| || || ||||| | Sbjct 2067979 TGTACGTCTCGATGGCCTTTTCAATATCGTCGCTGTGAATACCCACTGCCACACGCATAA 2068038 Query 148295 GCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGA 148354 ||||||| || || ||||| |||||||||||| |||||||| || ||| | || | Sbjct 2068039 GCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCA 2068098 Query 148355 GGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397 | || ||| ||||||| || | ||| | || ||| | ||||| Sbjct 2068099 GCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTA 2068141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609549733720