Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 120 4e-21
seq1 91.5 2e-12
>seq2
Length=7068955
Score = 120 bits (132), Expect = 4e-21
Identities = 200/289 (69%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
|||||| ||| ||| || ||| || ||||||| || || || ||||| || || |
Sbjct 2067974 CATGTCCCAGAAGTGCTTTACCCACGCTTCGCCCACCCTTTTCAACGCCGGAACCCCTCA 2067915
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
|| || || || || || || | |||||||| | || |||||||| || ||
Sbjct 2067914 ACCTCAACTGTCCTCCTGTTTCTTGATTGACATGAAAGAAGACAGCATCGAGGGAATATA 2067855
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
|||||| |||||| || || | ||||||||| | || || || || ||| | ||
Sbjct 2067854 TGACACCCTCAAGACTTGTGCCATGATCTCCAAGACAGCTGGAGGTATTGGTCTCAATGC 2067795
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
|| | || ||| | || ||||| | || |||||||| ||| |||||||| ||
Sbjct 2067794 CCATTGCATTCGTGCCACAGGATCCTACATTGCAGGCACCAATGGCACCTCCAACGGGCT 2067735
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
| | |||||||||||||| || || | || || ||||||||||| |||
Sbjct 2067734 TATCCCCATGCTTCGCGTCTTCAATAATACTGCTCGCTACGTCGATCAG 2067686
>seq1
Length=8230860
Score = 91.5 bits (100), Expect = 2e-12
Identities = 213/306 (70%), Gaps = 18/306 (6%)
Strand=Plus/Minus
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || || |||||||| |||| ||| || || || |||||||| || ||||||||
Sbjct 2004789 ATGGAGAATATCCACTCGGAAATGTACAGCCTTCTCATTGACACCTATGTAAAGGACCCC 2004730
Query 1456072 GTCGAGAAGGACCACCTCT-TTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129
|||||| || ||| |||| |||||||||||| | || | | | || || |
Sbjct 2004729 AAAGAGAAGA--CATATCTGTTCGACGCCATCGACACAATCCCTTGCATTCGCAAGAAAG 2004672
Query 1456130 CCGACTGGGCGATGAAGTGG--ATCA-ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186
| |||||||| || ||| |||| |||| ||| |||| ||||||| | || ||
Sbjct 2004671 CAGACTGGGCTCTGCGATGGATATCAGACAAAGAG----TCGA-GCTTTGCCCAACGACT 2004617
Query 1456187 CGTCGGCTTT-GCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTT 1456243
|| |||||| || | |||||| |||||||| ||||| || | | ||| |||||||
Sbjct 2004616 AGT-GGCTTTCGCAGCCGTCGAAGGCATCTTCTTCTCTGG-ATCCTTTGCATCCATCTTC 2004559
Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCG 1456303
||||| |||| || || |||||||| | || ||| |||||| | ||| |||
Sbjct 2004558 TGGCTGAAGAGCAAAGGACTGATGCCCGG-CCTCACCTTCTCCAACGAGCTCATCTCTCG 2004500
Query 1456304 CGACGA 1456309
|||||
Sbjct 2004499 TGACGA 2004494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177784482840874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |