Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq7 149 6e-31
seq5 118 1e-21
seq6 82.4 7e-11
>seq7
Length=4110827
Score = 149 bits (164), Expect = 6e-31
Identities = 174/231 (75%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | |||| |||||| || ||||| |||||||| || |||||||| |||
Sbjct 1062897 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 1062956
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || ||| |||| |||| |||||| ||||| || |||| |||||||||||||| ||||
Sbjct 1062957 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 1063016
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| || |||||||||| |||||| ||| | |||| | | |||||| |||| ||
Sbjct 1063017 ATGCCCTCCTTGTCCTGGATCTTCGACTTGA-CGTTGTCGATCGTGTCTGAGCTC---TC 1063072
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||||| ||| ||||| || || || | || || || || || |||||
Sbjct 1063073 CACCTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123
Score = 123 bits (136), Expect = 2e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | | || || |||| ||||||||||| ||||||||
Sbjct 1063161 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAG 1063220
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | || | | ||||||||| |||||| ||| | |||
Sbjct 1063221 ATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTGGATCTTGCTCTTGA-CGTT 1063279
Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | ||||||||||||||| ||||||| ||||||||| || || || | || || ||
Sbjct 1063280 GTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTAC 1063339
Query 35725 AAATATCTGCAT 35736
|| || |||||
Sbjct 1063340 GAAGATTTGCAT 1063351
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || |||| || || ||||| || || ||
Sbjct 1063388 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAA 1063447
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||||| || | || |||||||||| |||||| || | | |
Sbjct 1063448 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTGACATT 1063507
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||||||| || || ||||| | |||||| || || || || | || |||||
Sbjct 1063508 GTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCAC 1063567
Query 35725 AAATATCTGCAT 35736
|| || |||||
Sbjct 1063568 GAAGATTTGCAT 1063579
>seq5
Length=4609732
Score = 118 bits (130), Expect = 1e-21
Identities = 145/193 (75%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| | ||| || |||| ||||||||||| ||||||||
Sbjct 1365012 TCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAG 1365071
Query 35606 ATCAACCGCTGCTGGTCCGAAG-GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| || | || | || ||||||||| ||||| ||| | ||
Sbjct 1365072 ATCAGGCGCTGCTGGTCGGATGTGATCCCT-TCCTTGTCCTAAATCTTGCTCTTGA-TGT 1365129
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | ||||||||||| || ||||||| ||||||||| || | || | || ||||
Sbjct 1365130 TGTTGATTGTGTCGCTCGACTCAACCTCCAGCGTGATCGTCTTGACAGTAAGTGTCTTCA 1365189
Query 35724 CAAATATCTGCAT 35736
|| ||||||||
Sbjct 1365190 TGAAAATCTGCAT 1365202
>seq6
Length=4175021
Score = 82.4 bits (90), Expect = 7e-11
Identities = 120/167 (72%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || ||||| | || || || ||||| || || || |
Sbjct 1383150 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGA 1383091
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
|||| ||||||||||| | || | || |||||||| |||||| ||| | ||||
Sbjct 1383090 TCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 1383032
Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||||||| ||| || ||||| | ||||| || || |||||
Sbjct 1383031 TCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 1382985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792039127160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |