Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 132 5e-26
seq7 125 7e-24
seq6 102 8e-17
seq5 95.1 1e-14
seq4 84.2 2e-11
>seq2
Length=7068955
Score = 132 bits (146), Expect = 5e-26
Identities = 286/422 (68%), Gaps = 7/422 (2%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||||||||| |||| ||||| ||||| |||||| |||| || ||||| ||| |
Sbjct 2068048 CAACACATGCTTATGCGTGTGGCAGTGGGTATTCACAGCGACGATATTGAAAAGGCCATC 2067989
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| |||||| | | ||||| ||| ||||| ||||||||||||||| | || |
Sbjct 2067988 GAGACGTACAATCTCATGTCCCAGAAGTGCTTTACCCACGCTTCGCCCACCCTTTTCAAC 2067929
Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743
|| || || |||||| ||||||| ||||| ||| | |||| |||||||||
Sbjct 2067928 GCCGGAACCCCTCAACCTCAACTGTCCTCCTGTTTCTTGATTGACATGAAAGAAGACAGC 2067869
Query 7744 ATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGC-GGCG 7801
||||| || || || |||| || | || ||| |||| || ||| || || || || |
Sbjct 2067868 ATCGAGGGAATATATGACACCCT-CAAGACTTGTGCCATGATCTCC-AAGACAGCTGGAG 2067811
Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACG 7861
| || ||||| || | | | | || |||| || | ||| | |||||| |
Sbjct 2067810 GTATTGGTCTCAATGCCCATTGCATTCGTGCCACAGGATCCTACATTGCAGGCACCAATG 2067751
Query 7862 GAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAG 7921
| | ||| ||| | |||||| | ||||| |||||||| | | || | || |
Sbjct 2067750 GCACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAATAATACTGCTCGCTACGTCG 2067691
Query 7922 ACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGG 7978
| ||||| || |||||| ||| || ||||||||| | ||||| |||||||| |
Sbjct 2067690 ATCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCAG 2067631
Query 7979 AC 7980
||
Sbjct 2067630 AC 2067629
Score = 116 bits (128), Expect = 4e-21
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 8712 GGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGC--GGAATATTGCAATACGAC 8769
||| || || ||| | |||| |||||||| | | ||| || || | |||||||||
Sbjct 2066897 GGGAACATATGAAACATACGAAGGCAGCCCAGT--GTCGCAAGGCATTCTTCAATACGAC 2066840
Query 8770 ATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCT 8829
|||||||||||||| ||| | |||||| ||||| || |||||| | | |||||
Sbjct 2066839 ATGTGGAATGTCACTCCCTCAGACTTGTGGGATTGGGACGCCTTGAAAGCCGAGATTGCC 2066780
Query 8830 CAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAA 8889
|| ||| | ||||| || || | || ||| ||||||||| ||| ||||| |||||
Sbjct 2066779 AAACATGGTATTCGCAACTCTCTCCTTGTTGCTCCCATGCCCACTGCCTCGACTTCTCAA 2066720
Query 8890 ATAATGGGAAACAACGAATCCTTTGAGCCGTTCAC 8924
|| | || |||||||||| ||| || |||| |||
Sbjct 2066719 ATCCTCGGCAACAACGAATGCTTCGAACCGTACAC 2066685
>seq7
Length=4110827
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||| || ||||| |||||||| || |||||||||||
Sbjct 1063125 CCGCCGCGGAGCCGGAGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAG 1063184
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| ||||| |||| |||||||| ||||||||
Sbjct 1063185 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGG 1063244
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || || || || ||||| ||| | |||||| |||||| ||
Sbjct 1063245 ATCCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAACC 1063304
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || || | || || ||||| ||||||||
Sbjct 1063305 TCCAGCGTGATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063351
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || || || ||||| || ||||||||||||
Sbjct 1063353 CCGCCACGGAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1063412
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| ||||| || ||||| || || |||| |||||||| || || ||
Sbjct 1063413 AGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 1063472
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || |||||| ||| | |||||| || || ||
Sbjct 1063473 ATGCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGACC 1063532
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || || ||||| ||||||||
Sbjct 1063533 TCAAGCGTGATGGTCTTGCCAGTAAGTGTCTTCACGAAGATTTGCAT 1063579
Score = 96.9 bits (106), Expect = 4e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|||| || ||| | ||| | |||| ||||| || ||||||||||||| | || |
Sbjct 1062906 AGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCGC 1062965
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || | ||| ||||| || ||||||| |||||||| || || || ||||| ||
Sbjct 1062966 CCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCCCTCC 1063025
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | ||||| || ||||| || || |||
Sbjct 1063026 TTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAGCGTA 1063085
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | || || ||||| ||||||||
Sbjct 1063086 ATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123
>seq6
Length=4175021
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
|||| || ||||||||||||| | || | || || || || ||||| || || |
Sbjct 1383150 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGA 1383091
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
|||| |||||||| |||||||| |||||||| || ||||| || || ||||| ||
Sbjct 1383090 TCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGT 1383031
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | ||||||||||| || || || || || ||||| || || || | || || ||||
Sbjct 1383030 CGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1382971
Query 134704 A 134704
|
Sbjct 1382970 A 1382970
>seq5
Length=4609732
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
|||||| || ||||| |||||||| || |||||||||||| |||| | ||| ||
Sbjct 1364993 CACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCGTCCTC 1365052
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
||||| ||||| ||||| |||| |||||||| |||| | || ||||| || || |
Sbjct 1365053 CAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCTA 1365112
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
||| || |||| || | ||||||| ||| || || || || || || || ||
Sbjct 1365113 AATCTTGCTCTTGATGTTGTTGATTGTGTCGCTCGACTCAACCTCCAGCGTGATCGTCTT 1365172
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
| || | || || | |||||| |||||
Sbjct 1365173 GACAGTAAGTGTCTTCATGAAAATCTGCAT 1365202
>seq4
Length=6030834
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| ||||| || ||||| || || |||||||| || |||||||||||| | ||| |
Sbjct 3720702 AGACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGG 3720643
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| ||||| || ||||| || || |||| || ||||| || || || ||||||||
Sbjct 3720642 CCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGAATGCCTTCC 3720583
Query 134616 TTTTCT 134621
|| |||
Sbjct 3720582 TTGTCT 3720577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396650058040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |