Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2 214 2e-50
seq1 100 4e-16
>seq2
Length=7068955
Score = 214 bits (236), Expect = 2e-50
Identities = 631/959 (66%), Gaps = 18/959 (2%)
Strand=Plus/Plus
Query 69277 GATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACAT 69336
|| || ||||| || || || ||||||| | | | |||| | ||||| || ||
Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTGTATTCGACAATCTCAGTGCAA 2067266
Query 69337 AGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCC 69396
||||| | | ||| ||||||| || | ||| || |||||| | || |||||||||
Sbjct 2067267 AGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCC 2067326
Query 69397 TTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACG 69456
||||| || ||| | || || |||||||| |||| | |||| |||| | ||| |
Sbjct 2067327 TTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCATAGT 2067386
Query 69457 ACCCTAGCATTTATTACGGTCTTGTAAC---GCTTCTCTTTTTCATAT-TGT-GTATATA 69511
| ||| |||| | |||| | || | ||| || |||||| | | ||||| |
Sbjct 2067387 TTCTGAGCCTTTA---CAGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTATAGA 2067443
Query 69512 GCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCA 69571
|| ||| ||| || || || | || || | | ||||| |||| ||||| | |
Sbjct 2067444 GC-GTT-GAACTCGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAGAAGA 2067501
Query 69572 ATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGC-T 69630
| ||| | | | | || || |||| ||| || | || ||| |||| | || |
Sbjct 2067502 GAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATGGCGT 2067561
Query 69631 ATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAAC 69690
| || || || | | |||| ||||| || || || ||| | || | | |||
Sbjct 2067562 AGAACAAG-TCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAAAAG 2067620
Query 69691 TCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTT 69750
|| | | || | |||||||| || || || || || | | || || || |||||
Sbjct 2067621 TCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTG 2067680
Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810
|| |||||||| | ||| | ||||| ||||| |||| | ||||| || |||| ||
Sbjct 2067681 CCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCG 2067740
Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAG 69868
|| || | ||||| || || | ||| || |||| | || ||||| | | || |
Sbjct 2067741 TTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTG 2067800
Query 69869 ATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATA 69928
| |||| || ||||| || | || ||||| | |||||| || | ||||||||||
Sbjct 2067801 A--GACCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATA 2067858
Query 69929 TACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTA 69988
| ||||| ||||| || ||| |||||| || | |||||| |||| |||| | ||
Sbjct 2067859 TTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAG 2067918
Query 69989 TAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGAT 70048
||||| || || || | || || || ||||| || || || || | || | ||||
Sbjct 2067919 GGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGAT 2067978
Query 70049 TGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATC 70107
|||| || || || || ||| ||||| | ||| ||||| || | || ||||||||
Sbjct 2067979 TGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATA 2068037
Query 70108 AACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCC 70167
| ||| || || || ||||| | || ||| || || | |||||||||| | |||
Sbjct 2068038 AGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCC 2068097
Query 70168 AGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226
|| || || || |||||||| | ||| ||||||| ||||| | ||| |||| ||
Sbjct 2068098 AGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAGTT 2068156
>seq1
Length=8230860
Score = 100 bits (110), Expect = 4e-16
Identities = 218/323 (67%), Gaps = 5/323 (2%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||| || ||||| || | |||||| || | | || | ||||| || || |||||
Sbjct 2004469 GCACGCAAAGTCCGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 2004528
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| || || | || ||||| || |||| ||||| |||||||| |||||
Sbjct 2004529 GCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAGAA 2004588
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---G 39792
||||||||| || ||||| || || || |||| | | | || | || || |
Sbjct 2004589 GATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCTGA 2004648
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | | ||||| || |||||||| | ||||| ||||| || || || |
Sbjct 2004649 TATCCATCGCAGAGCCCAGTCTGCTTTCTTGCGAATGCAAGGGATTGTGTCGATGGCGTC 2004708
Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
|| |||| |||| || || | || || ||||| || || || | || || ||||
Sbjct 2004709 GAACAGAT-ATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTACA 2004767
Query 39912 TTTCTGAATGGATGTTTTCAATC 39934
|||| || ||||| || || |||
Sbjct 2004768 TTTCCGAGTGGATATTCTCCATC 2004790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686906421578280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |