Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq7 100 2e-16
seq2 84.2 2e-11
>seq7
Length=4110827
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||| || | |||| |||||||||| || || |||
Sbjct 1063383 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 1063442
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || || ||||| || ||||| || | ||||| || || ||||||| |||
Sbjct 1063443 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTG 1063502
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | ||||| ||| || || || || || || | ||||| || || ||
Sbjct 1063503 ACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTC 1063562
Query 27231 TTCACAAAGATTTGCATAGCTGC 27253
||||| ||||||||||| || ||
Sbjct 1063563 TTCACGAAGATTTGCATGGCGGC 1063585
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079
||| || |||| | || ||||| || ||||| || || || || |||||||||||
Sbjct 1062896 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1062955
Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139
| | ||| |||| || | ||| || || ||| |||| || ||||| || ||||| ||
Sbjct 1062956 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 1063015
Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199
| ||||| || || |||||| || | | | || | ||||||| | || ||
Sbjct 1063016 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCAC 1063075
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || | ||||| || || || || || ||||||||||||
Sbjct 1063076 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCATA 1063124
>seq2
Length=7068955
Score = 84.2 bits (92), Expect = 2e-11
Identities = 372/583 (64%), Gaps = 21/583 (4%)
Strand=Plus/Plus
Query 130409 TCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCTGTT 130468
||||| ||||||||||| | | ||||||| | | ||||||| || |||||||| ||
Sbjct 2066289 TCGACAGTGAATTGAATAGGTTGTGTGGCCGCCATCGTGCGCAGGTAGTACATGCCGGTC 2066348
Query 130469 TTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGGTAATTG--GGTT 130526
||||| || ||||| || | ||| ||||| || ||| || | ||||
Sbjct 2066349 TTGAGACCCATTTTCCAGCCTGCAAAGTGCATGCTCGTGATC--TTGCCCATGGTTGGTT 2066406
Query 130527 GCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCA 130586
| || | |||||||| || || || || ||||| || || || | ||| || ||||
Sbjct 2066407 CCTTCAAGTGAATGTTGAGAGACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCA 2066466
Query 130587 TGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTT 130646
| | || | ||| | | || ||||| |||||||||||||| | | ||||
Sbjct 2066467 TTTGCAGGACGGTCCGCTGGCTGATTTCCCATACGGTCTTGTATAGAGCTTTGATGTCCG 2066526
Query 130647 TGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATAC 130706
|| | | | || ||| | ||| | ||| || || || ||||
Sbjct 2066527 CAGGAACGTTGGGGATGTTTTGGATCGAGCCGCCTTCGGCGATGATCCGATTCTTCATA- 2066585
Query 130707 TTTTATCGTACAAT----CCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATT 130762
|| ||| || || ||||| | || ||||| || | || ||| | |
Sbjct 2066586 --TTGTCGGACCATAGGCCCAAGTCG-ACGAGATCCTTCAGCAGCCAGGGATTGACAACC 2066642
Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822
|| || ||||| || ||||| || | | ||| || || ||| ||||||| ||| ||
Sbjct 2066643 TGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCAT 2066702
Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882
||||||||||||| ||||| | || | || ||||||||| || || | |||||
Sbjct 2066703 TCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAG 2066762
Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA---GAGAG 130939
|| |||| ||| || | | || | ||||| | ||||||||||| | |||
Sbjct 2066763 TTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAG 2066822
Query 130940 GTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTT 130982
| || ||||| |||||||| || |||| || |||||||
Sbjct 2066823 GGAG---TGACA---TTCCACATGTCGTATTGAAGAATGCCTT 2066859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424932965448024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |