Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq7 100 2e-16 seq2 84.2 2e-11 >seq7 Length=4110827 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | |||| |||||||||| || || ||| Sbjct 1063383 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 1063442 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || ||||| || ||||| || | ||||| || || ||||||| ||| Sbjct 1063443 GCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGATTTG 1063502 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| || || || || || || | ||||| || || || Sbjct 1063503 ACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGTGTC 1063562 Query 27231 TTCACAAAGATTTGCATAGCTGC 27253 ||||| ||||||||||| || || Sbjct 1063563 TTCACGAAGATTTGCATGGCGGC 1063585 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| | || ||||| || ||||| || || || || ||||||||||| Sbjct 1062896 GCCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1062955 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | ||| |||| || | ||| || || ||| |||| || ||||| || ||||| || Sbjct 1062956 GAGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGG 1063015 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| || | | | || | ||||||| | || || Sbjct 1063016 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCAC 1063075 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || || || || || |||||||||||| Sbjct 1063076 CTCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCATA 1063124 >seq2 Length=7068955 Score = 84.2 bits (92), Expect = 2e-11 Identities = 372/583 (64%), Gaps = 21/583 (4%) Strand=Plus/Plus Query 130409 TCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCTGTT 130468 ||||| ||||||||||| | | ||||||| | | ||||||| || |||||||| || Sbjct 2066289 TCGACAGTGAATTGAATAGGTTGTGTGGCCGCCATCGTGCGCAGGTAGTACATGCCGGTC 2066348 Query 130469 TTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGGTAATTG--GGTT 130526 ||||| || ||||| || | ||| ||||| || ||| || | |||| Sbjct 2066349 TTGAGACCCATTTTCCAGCCTGCAAAGTGCATGCTCGTGATC--TTGCCCATGGTTGGTT 2066406 Query 130527 GCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCA 130586 | || | |||||||| || || || || ||||| || || || | ||| || |||| Sbjct 2066407 CCTTCAAGTGAATGTTGAGAGACTGGGACTGGTCAATGAAGGCACCACGGTCCGCTGCCA 2066466 Query 130587 TGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTT 130646 | | || | ||| | | || ||||| |||||||||||||| | | |||| Sbjct 2066467 TTTGCAGGACGGTCCGCTGGCTGATTTCCCATACGGTCTTGTATAGAGCTTTGATGTCCG 2066526 Query 130647 TGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATAC 130706 || | | | || ||| | ||| | ||| || || || |||| Sbjct 2066527 CAGGAACGTTGGGGATGTTTTGGATCGAGCCGCCTTCGGCGATGATCCGATTCTTCATA- 2066585 Query 130707 TTTTATCGTACAAT----CCAAGCTGTACAAGATCTTTTACCAAATGATTATTAATGATT 130762 || ||| || || ||||| | || ||||| || | || ||| | | Sbjct 2066586 --TTGTCGGACCATAGGCCCAAGTCG-ACGAGATCCTTCAGCAGCCAGGGATTGACAACC 2066642 Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822 || || ||||| || ||||| || | | ||| || || ||| ||||||| ||| || Sbjct 2066643 TGGAACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCAT 2066702 Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882 ||||||||||||| ||||| | || | || ||||||||| || || | ||||| Sbjct 2066703 TCGTTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAG 2066762 Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA---GAGAG 130939 || |||| ||| || | | || | ||||| | ||||||||||| | ||| Sbjct 2066763 TTGCGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAG 2066822 Query 130940 GTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTT 130982 | || ||||| |||||||| || |||| || ||||||| Sbjct 2066823 GGAG---TGACA---TTCCACATGTCGTATTGAAGAATGCCTT 2066859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424932965448024