Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 4e-35
>seq2
Length=7068955
Score = 163 bits (180), Expect = 4e-35
Identities = 1120/1779 (63%), Gaps = 63/1779 (4%)
Strand=Plus/Plus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
|||| ||||| ||| | | |||| | | || || |||||||| ||||||||||| |
Sbjct 2066296 TGAATTGAATAGGTTGTGTGGCCGCCATCGTGCGCAGGTAGTACATGCCGGTCTTGAGAC 2066355
Query 110391 CTTGTTTCCATGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATG 110449
| |||||| || | || | ||||| | || |||| ||| ||||| |||| |
Sbjct 2066356 CCATTTTCCA-GCCTGCAAAGTGCATGCTCGTGATCTTGCCCATGGTTGG---TTCCTTC 2066411
Query 110450 AAGAG---GTTCATA--CTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT 110504
||| | ||| | | || |||| ||||||||||| || || | || ||||| |
Sbjct 2066412 AAGTGAATGTTGAGAGACTGGGACT--GGTCAATGAAGGCACCACGGTCCGCTGCCATTT 2066469
Query 110505 CAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564
| ||| | | | |||||||| || || || ||| ||||| || | |
Sbjct 2066470 GCAGGACGGTCCGCTGGCTGATTTCCCATACGGTCTTGTATAGAGCTTTGATGTCCGCAG 2066529
Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC-ATGA---GATCCTTCATA 110620
| | | | ||| || ||||| || || |||||| | |||| ||| |||||||
Sbjct 2066530 GAACGTTGGGGATGTTTTGGATCGAGCC----GCCTTCGGCGATGATCCGATTCTTCATA 2066585
Query 110621 TCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACA 110680
| | |||||| || || | | ||| || || | || |||||||
Sbjct 2066586 TTGTCGGACCATAGGCCCAAGTCGACGAGATCCTTCAGCAGCCAGGGATTGACAACCTGG 2066645
Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740
|||||||| || ||| | | |||||| || | |||||| ||||| ||||||||
Sbjct 2066646 AACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCATTCG 2066705
Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800
|| || || | |||||| | || ||||| || ||||| || || | | ||| |||
Sbjct 2066706 TTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTG 2066765
Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA---GT-TGAGCTT 110856
|||| ||| | | || | || | | ||||| || | || ||||
Sbjct 2066766 CGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAG--- 2066822
Query 110857 GGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAA 110916
|| | || |||| ||||||| | ||||| | ||||| ||| | || || || |
Sbjct 2066823 GGAGTGACATTCC-ACATGTCGTATTGAAGAATGCCTTGCGACACTGGGCTGCCTTCGTA 2066881
Query 110917 GGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATA 110976
|||||||| | || || | | |||| |||||| || || | || || ||
Sbjct 2066882 TGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTA 2066941
Query 110977 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCG 111036
||||| || ||||| | ||||| | | |||| || || || || | | ||
Sbjct 2066942 GATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAG-GAAGAC 2067000
Query 111037 GCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095
||| | || || | || |||||||||||||| || | ||| | |||| |||||| |
Sbjct 2067001 GCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGA 2067060
Query 111096 TATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTA 111152
|| ||| ||| ||| || || || | || | || || | |||||
Sbjct 2067061 AGTTGCTCTTCTTCGCT---TCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTA 2067117
Query 111153 GATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA---AGTGCGAG 111209
| || || |||| || |||| |||||||| | | ||| | | ||||
Sbjct 2067118 GGTTGCGAGTCACAACCTGAGTGACCTCATGAAGACGACCGAAGTCATATTCACCTCGAG 2067177
Query 111210 TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269
||| | ||| | | || || || | || |||| |||||| ||||| |||||
Sbjct 2067178 ---CTTGGTCGACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCAT 2067234
Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329
| | | ||||| || | ||| || || || | ||||| || || |||||||| |
Sbjct 2067235 CGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGT 2067294
Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389
|||| ||||| ||||| | ||||| || |||||||||||||| ||||||||||| || |
Sbjct 2067295 TCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTT 2067354
Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACA--ATGGCGTTGG 111446
| ||||||| | ||| ||||| | ||| | || | | || |||| |||||
Sbjct 2067355 CGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCT-TTACAGTCTGGCG--AC 2067411
Query 111447 CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGG 111506
| || |||||| ||| || | ||| || || | ||||| ||||| ||||||
Sbjct 2067412 CACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGG 2067471
Query 111507 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCG 111564
|| || ||||||| | |||||||| |||| ||||| | ||| ||| || ||
Sbjct 2067472 CAAGGCCAGGTGCCTCATGAGGACAGAAGAGAGTCCATT--CTTGGTTCTTCTCGACACG 2067529
Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTC 111624
| |||||| | ||| ||| |||||| || | || | || | | | |||||||
Sbjct 2067530 TTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTC 2067589
Query 111625 GTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 111684
| || ||||| || | | | || || | | || |||||||||||||| ||
Sbjct 2067590 CTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAG 2067649
Query 111685 ATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGT 111738
|||| || | || || | | ||| ||| | |||| || ||||| || ||
Sbjct 2067650 GTAGATGGCAAAAGCACC---TGGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGT 2067706
Query 111739 GGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT 111798
|| || ||||||||||| || |||| || | || ||||| || || |||
Sbjct 2067707 ATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTGGTGCCTGCAAT 2067766
Query 111799 ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGA 111858
||| |||| | | |||| | | |||||||| ||||| ||| ||
Sbjct 2067767 GTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCCAGCTGTCTTGGA 2067826
Query 111859 GATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGC 111918
||| ||||| | | || || |||| || || | ||| ||| || || || |
Sbjct 2067827 GATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTC 2067886
Query 111919 GATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGT 111978
|| | ||| || ||||| || ||| || || || || ||||| ||||| || |
Sbjct 2067887 AATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGA 2067946
Query 111979 TGCGTGAATGAA-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGT 112037
||||| | || || | |||||||| | ||| ||||| | | | ||||| |
Sbjct 2067947 AGCGTGGGTAAAGCACTTC-TGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATAT 2068005
Query 112038 CTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076
| || | ||| || || | ||| || ||||| | |||||
Sbjct 2068006 CGTCGCTGTGAATACCCACTGCCACACGCATAAGCATGT 2068044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029825439200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |