Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 163 4e-35 >seq2 Length=7068955 Score = 163 bits (180), Expect = 4e-35 Identities = 1120/1779 (63%), Gaps = 63/1779 (4%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||| ||||| ||| | | |||| | | || || |||||||| ||||||||||| | Sbjct 2066296 TGAATTGAATAGGTTGTGTGGCCGCCATCGTGCGCAGGTAGTACATGCCGGTCTTGAGAC 2066355 Query 110391 CTTGTTTCCATGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATG 110449 | |||||| || | || | ||||| | || |||| ||| ||||| |||| | Sbjct 2066356 CCATTTTCCA-GCCTGCAAAGTGCATGCTCGTGATCTTGCCCATGGTTGG---TTCCTTC 2066411 Query 110450 AAGAG---GTTCATA--CTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATAT 110504 ||| | ||| | | || |||| ||||||||||| || || | || ||||| | Sbjct 2066412 AAGTGAATGTTGAGAGACTGGGACT--GGTCAATGAAGGCACCACGGTCCGCTGCCATTT 2066469 Query 110505 CAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564 | ||| | | | |||||||| || || || ||| ||||| || | | Sbjct 2066470 GCAGGACGGTCCGCTGGCTGATTTCCCATACGGTCTTGTATAGAGCTTTGATGTCCGCAG 2066529 Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC-ATGA---GATCCTTCATA 110620 | | | | ||| || ||||| || || |||||| | |||| ||| ||||||| Sbjct 2066530 GAACGTTGGGGATGTTTTGGATCGAGCC----GCCTTCGGCGATGATCCGATTCTTCATA 2066585 Query 110621 TCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACA 110680 | | |||||| || || | | ||| || || | || ||||||| Sbjct 2066586 TTGTCGGACCATAGGCCCAAGTCGACGAGATCCTTCAGCAGCCAGGGATTGACAACCTGG 2066645 Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740 |||||||| || ||| | | |||||| || | |||||| ||||| |||||||| Sbjct 2066646 AACTCACCGGCAAGGACACGGCGAGAGTAGATATTAGATGTGTACGGTTCGAAGCATTCG 2066705 Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800 || || || | |||||| | || ||||| || ||||| || || | | ||| ||| Sbjct 2066706 TTGTTGCCGAGGATTTGAGAAGTCGAGGCAGTGGGCATGGGAGCAACAAGGAGAGAGTTG 2066765 Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA---GT-TGAGCTT 110856 |||| ||| | | || | || | | ||||| || | || |||| Sbjct 2066766 CGAATACCATGTTTGGCAATCTCGGCTTTCAAGGCGTCCCAATCCCACAAGTCTGAG--- 2066822 Query 110857 GGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAA 110916 || | || |||| ||||||| | ||||| | ||||| ||| | || || || | Sbjct 2066823 GGAGTGACATTCC-ACATGTCGTATTGAAGAATGCCTTGCGACACTGGGCTGCCTTCGTA 2066881 Query 110917 GGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATA 110976 |||||||| | || || | | |||| |||||| || || | || || || Sbjct 2066882 TGTTTCATATGTTCCCTGCTCCTTTGCCAGTTCACAAGAAGCAGTGAGAGCAGCATGGTA 2066941 Query 110977 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCG 111036 ||||| || ||||| | ||||| | | |||| || || || || | | || Sbjct 2066942 GATGGTCTCGAAGATTTGGATATTCAATTGCCTGGCCTCGGGAGAGTCGAAAG-GAAGAC 2067000 Query 111037 GCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 ||| | || || | || |||||||||||||| || | ||| | |||| |||||| | Sbjct 2067001 GCAGCGCAAGGAAGGCGTCGGCGAGACCTTGAACTCCGAGACCGACGGGTCGGTGTCGGA 2067060 Query 111096 TATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTA 111152 || ||| ||| ||| || || || | || | || || | ||||| Sbjct 2067061 AGTTGCTCTTCTTCGCT---TCAGGGACAGGGTAGTAGTTGATATCGATAATCTTGTTTA 2067117 Query 111153 GATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA---AGTGCGAG 111209 | || || |||| || |||| |||||||| | | ||| | | |||| Sbjct 2067118 GGTTGCGAGTCACAACCTGAGTGACCTCATGAAGACGACCGAAGTCATATTCACCTCGAG 2067177 Query 111210 TCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCAT 111269 ||| | ||| | | || || || | || |||| |||||| ||||| ||||| Sbjct 2067178 ---CTTGGTCGACGAATGTCGGGAGAGCCAGGGAGGCCAGATTGCACACAGCGACCTCAT 2067234 Query 111270 CCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAAT 111329 | | | ||||| || | ||| || || || | ||||| || || |||||||| | Sbjct 2067235 CGGGAGCCGTGTATTCGACAATCTCAGTGCAAAGATTGGAGCTTCGGATGGTCCCCAAGT 2067294 Query 111330 TCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCT 111389 |||| ||||| ||||| | ||||| || |||||||||||||| ||||||||||| || | Sbjct 2067295 TCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAGAGCATATAGGGCGTCCCAGTTT 2067354 Query 111390 CCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACA--ATGGCGTTGG 111446 | ||||||| | ||| ||||| | ||| | || | | || |||| ||||| Sbjct 2067355 CGGTCTGTGCCTCGAGGATAGCATACCATAGTTTCTGAGCCT-TTACAGTCTGGCG--AC 2067411 Query 111447 CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGG 111506 | || |||||| ||| || | ||| || || | ||||| ||||| |||||| Sbjct 2067412 CACGGCCCTCCTTCTCATATCTCTCGTATAGAGCGTTGAACTCGTCACCATAGACGTCGG 2067471 Query 111507 AGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCG 111564 || || ||||||| | |||||||| |||| ||||| | ||| ||| || || Sbjct 2067472 CAAGGCCAGGTGCCTCATGAGGACAGAAGAGAGTCCATT--CTTGGTTCTTCTCGACACG 2067529 Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTC 111624 | |||||| | ||| ||| |||||| || | || | || | | | ||||||| Sbjct 2067530 TTCCATGAACAAGTCAGGAGTCCACATGGCGTAGAACAAGTCGCGTGCTCTAACCTCTTC 2067589 Query 111625 GTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 111684 | || ||||| || | | | || || | | || |||||||||||||| || Sbjct 2067590 CTTGCCGTGGTTCTTTCTCAGGTTCAAAAAGTCGAACACGTCTGCGTGCCATGGCTCGAG 2067649 Query 111685 ATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGT 111738 |||| || | || || | | ||| ||| | |||| || ||||| || || Sbjct 2067650 GTAGATGGCAAAAGCACC---TGGGCGCTTATTGCCACCCTGATCGACGTAGCGAGCAGT 2067706 Query 111739 GGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT 111798 || || ||||||||||| || |||| || | || ||||| || || ||| Sbjct 2067707 ATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTGGTGCCTGCAAT 2067766 Query 111799 ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGA 111858 ||| |||| | | |||| | | |||||||| ||||| ||| || Sbjct 2067767 GTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGACCAATACCTCCAGCTGTCTTGGA 2067826 Query 111859 GATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGC 111918 ||| ||||| | | || || |||| || || | ||| ||| || || || | Sbjct 2067827 GATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGTCTTCTTTCATGTC 2067886 Query 111919 GATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGT 111978 || | ||| || ||||| || ||| || || || || ||||| ||||| || | Sbjct 2067887 AATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGAAAAGGGTGGGCGA 2067946 Query 111979 TGCGTGAATGAA-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGT 112037 ||||| | || || | |||||||| | ||| ||||| | | | ||||| | Sbjct 2067947 AGCGTGGGTAAAGCACTTC-TGGGACATGAGATTGTACGTCTCGATGGCCTTTTCAATAT 2068005 Query 112038 CTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076 | || | ||| || || | ||| || ||||| | ||||| Sbjct 2068006 CGTCGCTGTGAATACCCACTGCCACACGCATAAGCATGT 2068044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029825439200