Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3 358 2e-93 seq9 179 1e-39 >seq3 Length=6051644 Score = 358 bits (396), Expect = 2e-93 Identities = 958/1454 (66%), Gaps = 24/1454 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || |||||| ||||||| || || || ||||| | || | | | |||| || Sbjct 1416242 GCCATTGGTATCGATCTAGGTACAACCTACTCGTGTGTAGGCGTCTTCCGAGATGACCGC 1416183 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | || || ||||| || || || || ||| |||| || || || | |||||| || ||| Sbjct 1416182 ATCGAGATTATTGCCAACGACCAGGGCAACCGAACCACTCCCTCGTTCGTTGCTTTCACC 1416123 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| ||||||||||| | ||||| || |||| || || || | || Sbjct 1416122 GACACAGAGCGTCTGATTGGTGATGCCGCAAAGAACCAAGTCGCGATGAACCCTCACAAC 1416063 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTC--TGACAAA-TCTACACA 349434 || || ||||| || |||||||| |||||| | || || | || | || || || Sbjct 1416062 ACCGTCTTTGACGCCAAGCGACTGATTGGTCGGAAATTCAGCGATGCCGAAGTC----CA 1416007 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | | || | || || || || || | || || | ||| |||| || ||| | || Sbjct 1416006 AGCCGACATGAAGCACTTCCCCTTCAAGGTCATTG-ACAAG--GGTGGCAAGCCAGTCAT 1415950 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 |||| || | ||||||||| | || || || ||||||||| || || || ||||| Sbjct 1415949 CCAGGTGGAGTTCAAAGGTGAAGAGAAGCAGTTCACACCCGAAGAGATCTCCTCCATGGT 1415890 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 || || |||| || | ||| || |||| | |||| ||||| | | || || Sbjct 1415889 CTTGACCAAGATGAGAGAGACTGCGGAGTCATACCTCGGTGGCACAGTCAACAACGCAGT 1415830 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 |||||||| || ||||| || || || | ||||| || || || |||||||| Sbjct 1415829 CATTACTGTCCCTGCCTACTTCAACGACTCTCAGCGCCAAGCTACCAAGGATGCTGGTCT 1415770 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 || || || | || || || | || || || |||||||||||||| || ||||| || Sbjct 1415769 GATCGCAGGCCTCAACGTCCTCCGTATCATCAACGAACCCACTGCTGCCGCCATTGCCTA 1415710 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || || || | | ||| || ||| | || || || ||| | |||||||| Sbjct 1415709 CGGTCTCGACAAGAAGGCTGAGGGTGAGCGCAATGTCCTCATCTTCGATCTTGGTGGTGG 1415650 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || | || |||| ||||| || || ||||| || | ||||| Sbjct 1415649 TACTTTCGATGTTTCTCTCTTGACCATTGAGGAGGGTATCTTCGAAGTCAAGTCCACTGC 1415590 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 || || || || | ||||| ||||| || || || ||||| || || || ||||| Sbjct 1415589 CGGCGACACTCACTTGGGTGGTGAAGACTTCGACAACCGTCTTGTCAACCACTTCGTTAA 1415530 Query 349915 AGAATTTAAGCGTCAAGCTAAAATTG---ATATTGGAG--ATAATCCTAGAGCAATGCGT 349969 ||||| || || ||||| || | | | | ||| ||| || | || ||||| Sbjct 1415529 CGAATTCAAACG-CAAGC----ATCGGAAAGACTTGAGCAGCAATGCTCGGGCTCTGCGT 1415475 Query 349970 CGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCT 350029 || || ||||||| ||||| ||||| ||||| || | || || || | || |||||| Sbjct 1415474 CGTCTCCGAACTGCCTGTGAGCGTGCCAAGCGCACCCTGTCCTCGTCTGCACAGACCTCT 1415415 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 || ||||| ||||| || || |||| || |||| | || || || || || || Sbjct 1415414 ATCGAAATCGATTCCCTCTACGAAGGCATCGACTTCTACACCTCGATCACCCGAGCCCGT 1415355 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 || ||||| | || |||||| || || | || ||||| |||||||| || | Sbjct 1415354 TTCGAAGAGCTCTGCCAGGATCTCTTCCGATCTACTATGGAGCCTGTGGAGCGTGTCCTG 1415295 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 ||||| || || ||| | || | ||| | || || || |||||||| || Sbjct 1415294 CGTGATGCCAAGATCGACAAGTCTTCCGTTCACGAAATCGTCTTGGTCGGTGGTTCCACC 1415235 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGA 350269 ||||| || | | | || || | | || || || || || ||||| || || | | Sbjct 1415234 CGTATCCCCAGAATCCAGAAGCTTGTTTCCGACTTCTTCAACGGCAAGGAGCCCAACAAA 1415175 Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCT 350329 ||||| || || ||||| || || || || |||||||| || || || |||| | ||| Sbjct 1415174 TCAATCAACCCCGATGAGGCCGTCGCCTACGGTGCTGCCGTCCAAGCCGCTATCCTGTCT 1415115 Query 350330 GGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 || | | || || | | || | || || | ||||| | ||||| || Sbjct 1415114 GGTGACACCTCGTCCAAGTCGACCAACGAGATCTTGCTCTTGGATGTCGCGCCACTGTCC 1415055 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTA 350446 || || | || ||| |||||| || |||||| ||| || | || | || | Sbjct 1415054 CTCGGTATCGAGACTGCTGGTGGTGTCATGACTCCTCTCATCAAGCGCAACACCACCATC 1414995 Query 350447 CCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATT 350506 || || || |||||| | || || || || || | || || ||||| | || ||| Sbjct 1414994 CCCACCAAGAAGTCCGAGACCTTCTCCACCTTCTCTGACAACCAGCCTGGTGTGCTTATT 1414935 Query 350507 CAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACC 350566 ||||| | || ||||| ||||||||||| || || || || ||||| | || Sbjct 1414934 CAAGTCTACGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTGCTTGGCAAGTTCGAA 1414875 Query 350567 CTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATT 350626 || | ||||| || || | || ||||| ||||| || ||| | |||||| || Sbjct 1414874 CTTTCCGGTATTCCCCCTGCTCCCCGTGGTGTTCCCCAGATCGAGGTCACATTCGATCTT 1414815 Query 350627 GATTCAAATGGTAT 350640 ||| | || || || Sbjct 1414814 GATGCCAACGGAAT 1414801 >seq9 Length=194725 Score = 179 bits (198), Expect = 1e-39 Identities = 733/1140 (64%), Gaps = 53/1140 (5%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||||||||| || | |||||| ||| || ||||||||| |||| || ||||| | Sbjct 128517 CCCGAAGAAATCTCCGCCATGGTTCTAGGCAAGATGAAGGAAGTTGCGGAGGCATACCTG 128458 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | ||| || | || ||| | || || || || || || || || || ||||| Sbjct 128457 GGCAAGAAAGTTACCCACGCAGTTGTCACGGTCCCGGCATACTTCAACGACGCTCAGCGA 128398 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || ||||||||||| | || || || || | |||||| | | | || || Sbjct 128397 CAAGCTACCAAAGATGCTGGTACTATCGCTGGTTTGACTGTTCTGCGTGTTGTGAACGAG 128338 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || ||||| ||||| || || ||||| || || || || | | |||| | | || Sbjct 128337 CCAACTGCCGCAGCTATCGCCTATGGCCTGGACAA---GAAGGGCAAAGAGAGCCAGATC 128281 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | | ||| | ||||||||||| || ||||| || || || || ||||||| || Sbjct 128280 ATTGTCTACGATCTTGGTGGTGGTACATTCGATGTTTCCCTTCTTTCAATTGAAGATGGC 128221 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 |||| || || || || || ||||| || ||||||||||| ||||| || || | Sbjct 128220 GTTTTCGAGGTCCTGGCCACCGCCGGTGACACTCATCTTGGTGGCGAAGACTTCGACCAA 128161 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA----ATTGATATTGG 349947 || | || | ||||| || ||| || |||| || | ||||| | Sbjct 128160 CGAGTGATTGACTACTTTGTGAAGAAATACAA----CAAGGAGAACGATGTCGATATCCG 128105 Query 349948 AGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTG----TGAACGTGCTAAGCGTT 350003 | ||| | | ||| || || ||| ||||| ||||| || ||||| Sbjct 128104 CAAGGATCTGAAGACCATGGGTAAGCT--GAA--GCGTGAGGTGGAACGCGCCAAGCGAA 128049 Query 350004 CCTTATCATCTACTACCCAAACCTCT------ATTGAAATTGATTCTCTTGCTGATGGCA 350057 || | || | |||||| ||| || ||||| || || | | || | Sbjct 128048 CCCTTTCCT------CCCAAATGTCTACACGAATCGAAATCGAAGCTTTCCACAACGGAA 127995 Query 350058 AAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTA 350117 | || |||| | || | || || ||| ||| || || || ||||| ||| || Sbjct 127994 AGGACTTCTCTGAGACTTTGACCCGGGCTAAGTTCGAGGAGTTGAACATGGA-CTTGTTC 127936 Query 350118 GAGCA-ACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATC-- 350174 || | || | | || || ||| | ||||| || ||||| || ||| | ||||| Sbjct 127935 AAGAAGACGCTTAAGCCGGTCGAACAGGTATTGAAGGATGC--CAAGGTCAAGAAATCCG 127878 Query 350175 AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTAC 350234 ||||||| || | || | |||||||||| || |||||||| || ||| |||| | Sbjct 127877 AGATTGACGACATTGTCCTGATTGGTGGTTCGACTCGTATTCCCAAGGTT---CAGTCAA 127821 Query 350235 T-ATC--TGAGTTTTTTAATGGCAA-AGAACCTTCTAGATCAATTAATCCAGATGAAGCT 350290 | ||| || || ||| |||||| | | || | || || || || || || ||| Sbjct 127820 TGATCGAGGAATTCTTTGGTGGCAAGAAAGCCAGCAAG-GGTATCAACCCTGACGAGGCT 127762 Query 350291 GTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATT 350350 || |||||||| || || ||||||| | || | ||||| | | | || Sbjct 127761 GTCGCATATGGCGCAGCCGTTCAGGGTGGTGTTCTCTCTGGCGAAA------CCGGAACC 127708 Query 350351 GATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAA 350410 || || || | || | ||||| | ||| || | || || | |||||| | |||| | Sbjct 127707 GAAGACCTTATTCTCATGGATGTCAATCCTCTGACTCTCGGCATTGAAACTACCGGTGGA 127648 Query 350411 GTAATGACTGTTCTTATTCCTAGAAATAGTACT-GTACCTACAAAAAAGTCCCAAACTTT 350469 || ||||| || ||||| |||| | ||| ||||| || || || ||||||| || Sbjct 127647 GTCATGACCAAACTCATTCCCCGAAACA-CACTGGTACCGACCAAGAAATCCCAAATCTT 127589 Query 350470 TTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGC 350529 ||||| ||| ||||| || || | ||| || || || |||||||| ||||| || Sbjct 127588 CTCTACGGCTGCGGATAACCAACCCGTAGTACTGATCCAGGTTTTTGAAGGCGAACGAGC 127529 Query 350530 TCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCC 350589 || || || || || || || |||| || | | ||||| || || Sbjct 127528 AATGACCAAGGACAACAACCTTCTGGGCAAATTCGAACTGACCGGTATTCCTCCCGCCCC 127469 Query 350590 TAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGT 350649 | | || ||||||||||||||||| |||||||| | || |||| |||||| | || || Sbjct 127468 TCGTGGTGTTCCTCAGATTGAAGTGTCTTTCGAACTCGACGCAAACGGTATTCTCAAGGT 127409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249022267431