Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2 176 5e-39
seq6 145 8e-30
seq1 82.4 8e-11
>seq2
Length=7068955
Score = 176 bits (194), Expect = 5e-39
Identities = 461/698 (66%), Gaps = 4/698 (1%)
Strand=Plus/Minus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
||||||||| | | ||| ||| |||| |||||| ||||| |||| ||||| ||||||
Sbjct 2067988 GAGACGTACAATCTCATGTCCCAGAAGTGCTTTACCCACGCTTCGCCCACCCTTTTCAAC 2067929
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
|| || || ||| ||||| |||| ||| ||| || | | ||||| || |||
Sbjct 2067928 GCCGGAACCCCTCAACCTCAACTGTCCTCCTGTTTCTTGATTGACATGAAAGAAGACAGC 2067869
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
||||| || || || || || |||||| |||||| ||||||||| | || |||
Sbjct 2067868 ATCGAGGGAATATATGACACCCTCAAGACTTGTGCCATGATCTCCAAGACAGCTGGAGGT 2067809
Query 53423 ATCGGTATCCACTGCTCGAA-CGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481
|| ||| || | ||| | | | ||||| | || | || || || || ||
Sbjct 2067808 ATTGGTCTCAA-TGCCCATTGCATTCGTGCCACAGGATCCTACATTGCAGGCACCAATGG 2067750
Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541
| | || | || | | || ||||| ||||||||||| || || || || |||||| |
Sbjct 2067749 CACCTCCAACGGGCTTATCCCCATGCTTCGCGTCTTCAATAATACTGCTCGCTACGTCGA 2067690
Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601
|||||||| |||||| || | || ||||||||||||||||| |||||||| ||
Sbjct 2067689 TCAGGGTGGCAATAAGCGCCCAGGTGCTTTTGCCATCTACCTCGAGCCATGGCACGCAGA 2067630
Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGA 53661
| | | || ||| | | ||| | ||| || || | |||||| | | || ||
Sbjct 2067629 CGTGTTCGACTTTTTGAACCTGAGAAAGAACCACGGCAAGGAAGAGGTTAGAGCACGCGA 2067570
Query 53662 CCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720
| |||| ||| || |||||| ||| ||| | |||||| || || |||||| || | |
Sbjct 2067569 CTTGTTCTAC-GCCATGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGAAGAACCAAG 2067511
Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGT 53780
| ||| || | || || | ||| || ||||| | ||||| ||||| ||||
Sbjct 2067510 AATGGACTCTCTTCTGTCCTCATGAGGCACCTGGCCTTGCCGACGTCTATGGTGACGAGT 2067451
Query 53781 TTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGC 53840
| |||| | || || || | ||||||| ||| || ||||| |
Sbjct 2067450 TCAACGCTCTATACGAGAGATATGAGAAGGAGGGCCGTGGTCGCCAGACTGTAAAGGCTC 2067391
Query 53841 GTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCT 53900
| ||||| |||| |||||| || ||| || || || ||||| || ||| ||
Sbjct 2067390 AGAAACTATGGTATGCTATCCTCGAGGCACAGACCGAAACTGGGACGCCCTATATGCTCT 2067331
Query 53901 ACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
||||||| | ||| ||||||||||||||||||
Sbjct 2067330 ACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAAC 2067293
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/140 (74%), Gaps = 6/140 (4%)
Strand=Plus/Minus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
|| || |||||||| | ||| ||||||||||||||||| ||||| | || || | ||
Sbjct 2066461 GCGGACCGTGGTGCCTTCATTGACCAGTCCCAGTCTCTCAACATTCACTTGAAGGAACCA 2066402
Query 55847 TCACTGGCCAAGTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903
| ||| |||| | |||| ||||||||| || ||||| | ||| ||||||||
Sbjct 2066401 ACCATGGGCAAGATCACGAGC---ATGCACTTTGCAGGCTGGAAAATGGGTCTCAAGACC 2066345
Query 55904 GGTATGTACTATCTGCGGAC 55923
|| |||||||| ||||| ||
Sbjct 2066344 GGCATGTACTACCTGCGCAC 2066325
>seq6
Length=4175021
Score = 145 bits (160), Expect = 8e-30
Identities = 216/304 (71%), Gaps = 2/304 (1%)
Strand=Plus/Plus
Query 117298 TAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACC 117357
||| || ||||||||||| |||| |||||||| ||| |||| || || |||||
Sbjct 476858 TAGACGGGTGAAAATGTATCGAGCGCTTGCAGAATCGCTGCCGCCCTGGTTTCGGGTACC 476917
Query 117358 GAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAA 117417
||||| || |||||||| | ||| | ||||| | || |||||| |||| ||||
Sbjct 476918 AAATTGGCCTGAGGGCTCCAACAAGTTGACATTGTTCGATCCGACAAAGCTTTGGGCCAG 476977
Query 117418 GTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCAC 117477
| ||||||||| ||||| | ||||||||||||||||| ||| | | ||
Sbjct 476978 GCCGACAATCGTCTGCTGGAGAGATGTTTCACCATGGTGATACGCGGTCATACCACCGAC 477037
Query 117478 GTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATA 117537
| |||||||||| ||| |||||||| || |||| || ||||| ||| |||||
Sbjct 477038 CAAACCCGCCAGCTCAGCAACCTTCATATCCTTTTTCAGATTGCGCTTGAAGCATGCATA 477097
Query 117538 AATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGA-GGGATCGAACGCTTGA 117596
|| || || ||||||| ||||| |||||||| | || ||| ||||| || || ||
Sbjct 477098 CATGACTTTTCGCTGACCAGGCTTTAGACCATCAACTAC-TGAGGGGATAGATCGGATGT 477156
Query 117597 TGTC 117600
||||
Sbjct 477157 TGTC 477160
Score = 86.0 bits (94), Expect = 7e-12
Identities = 189/282 (67%), Gaps = 1/282 (0%)
Strand=Plus/Plus
Query 152025 ACGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAA 152084
||| ||||| |||||||| | ||| || | ||| |||| || || || |||||
Sbjct 476861 ACGGGTGAAAATGTATCGAGCGCTTGCAGAATCGCTGCCGCCCTGGTTTCGGGTACCAAA 476920
Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144
|| || |||||||| | | ||||| ||||| | || || || | || ||||
Sbjct 476921 TTGGCCTGAGGGCTCCAACAAGTTGACATTGTTCGATCCGACAAAGCTTTGGGCCAGGCC 476980
Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204
|||||||| ||| ||| | |||||| ||||||||||| ||| | ||| |
Sbjct 476981 GACAATCGTCTGCTGGAGAGATGTTTCACCATGGTGATACGCGGTCATACCACCGACCAA 477040
Query 152205 TCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAAT 152264
||||||| || || |||||||| ||| | |||| || ||||| || || || ||
Sbjct 477041 ACCCGCCAGCTCAGCAACCTTCATATCCTTTTTCAGATTGCGCTTGAAGCATGCATACAT 477100
Query 152265 CACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGG 152306
|| || ||||| || || | ||| || || || |||||
Sbjct 477101 GACTTTTCGCTGACCAGGCTTTAGACCATCAACTAC-TGAGG 477141
>seq1
Length=8230860
Score = 82.4 bits (90), Expect = 8e-11
Identities = 173/255 (68%), Gaps = 5/255 (2%)
Strand=Plus/Plus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
||||| ||||| ||||| |||||| ||| ||||||| ||||| ||| ||||
Sbjct 2004527 AGGCCGGGCATCAGTCCTTTGCTCTTCAGCCAGAAGATGGATGCAAAGGATCCAGAGAAG 2004586
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA---CGGTGCATCGGAA 74921
|||||||||||||| || || || || || ||||| || || || | | |
Sbjct 2004587 AAGATGCCTTCGACGGCTGCGAAAGCCACTAGTCGTTGGGCAAAGCTCGACTCTTTGTCT 2004646
Query 74922 GTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGC-AGGGACAGTATCGATCGC 74980
| ||||| | ||||||| || || |||| | || || ||||| || ||||| ||
Sbjct 2004647 GATATCCATCGCAGAGCCCAGTCTGC-TTTCTTGCGAATGCAAGGGATTGTGTCGATGGC 2004705
Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040
| ||| || || |||||||| ||| ||||| || ||||||| | ||| |||
Sbjct 2004706 GTCGAACAGATATGTCTTCTCTTTGGGGTCCTTTACATAGGTGTCAATGAGAAGGCTGTA 2004765
Query 75041 CGTCTCCGAATGAAT 75055
| | ||||| || ||
Sbjct 2004766 CATTTCCGAGTGGAT 2004780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547214105264600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |