Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 2e-24
>seq2
Length=7068955
Score = 127 bits (140), Expect = 2e-24
Identities = 226/325 (70%), Gaps = 6/325 (2%)
Strand=Plus/Minus
Query 30137 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC-CACGGCGTTTTGCAGCTGATC 30195
||||| |||||||| | ||| ||| || ||| | || ||| | | || | ||| ||
Sbjct 5086306 ATGATCCGCCTGTCGTATGGATTGGTCTTGA-GTTTTCGCACCACCTCTTTGATCTGGTC 5086248
Query 30196 CACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCA 30255
||| || | |||| |||||||| |||| ||||||||||||||||||| | |||
Sbjct 5086247 CACTCCTTTGCCCGTGTAGTCTGTATGGCAGTCCTTGTACTCTGCTCCGAAATGGCGCCA 5086188
Query 30256 CTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTC 30315
|| || ||||| || || || || ||||| || || | || |||| ||| ||||||
Sbjct 5086187 TTGAAATCCGTAGACAGGGCCGAGATCTCCTTCCTCGCGGTCAACGAATCCCAACTTGTC 5086128
Query 30316 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT--TTACCCCCTTCTCAGAGAGCTCT 30373
| || |||| || ||||| |||||||||| | | || ||||| ||||||
Sbjct 5086127 GAGGAATTCTCGCGAGCCGTTCCCGTCCCAGATGTGGATGCCTGCTTCTGAGAGAG--GC 5086070
Query 30374 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30433
|| || | ||| | ||| ||||||||||||||||| |||||| ||||
Sbjct 5086069 TTCGATGTCGTGCAGCCTGATACGAACCACAGCAGCTCGGTGGTGACGGCTCGTAGAAAG 5086010
Query 30434 ACCCTCTTGGTCGTGAGGAGGGGAA 30458
|| | || || |||||||||||||
Sbjct 5086009 ACGCGTTTAGTGGTGAGGAGGGGAA 5085985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406309028321484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |