Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq7 152 1e-31
seq6 120 7e-22
seq5 100 7e-16
seq4 100 7e-16
>seq7
Length=4110827
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| || || | ||| | ||| ||| || |||||||| || || || ||
Sbjct 1062902 ACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTGAGAGT 1062961
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| || || |||| ||||||||| ||||| || || || || ||||| ||||||| ||
Sbjct 1062962 CCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGAATGCC 1063021
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| ||||| ||||| ||||| || ||||| ||
Sbjct 1063022 CTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACCTCCAG 1063081
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||| || || || |||||||| || | |||||
Sbjct 1063082 CGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123
Score = 150 bits (166), Expect = 4e-31
Identities = 163/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || || || || || || || || |||||||| || |||| || || | || ||
Sbjct 1063140 AGCACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 1063199
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| ||||| || ||||| || || | ||||||||||||
Sbjct 1063200 TCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCC 1063259
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|||||||| || ||||| ||||| ||||| ||| ||||||||| || ||||||
Sbjct 1063260 TGGATCTTGCTCTTGACGTTGTCGATCGTGTC---GCTCGATTCAACCTCCAGCGTGATC 1063316
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || |||||||| || | |||||
Sbjct 1063317 GTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063351
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || || | ||||| | || |||
Sbjct 1063368 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 1063427
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| |||||||| ||||| || ||||| || || | || |||||||||
Sbjct 1063428 TCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1063487
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| ||| || || ||||| ||||| | || ||||| || ||||| |||
Sbjct 1063488 TGGATCTTGGATTTGACATTGTCGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTC 1063547
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | |||||
Sbjct 1063548 TTGCCAGTAAGTGTCTTCACGAAGATTTGCAT 1063579
>seq6
Length=4175021
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || || || | |||||||| || |||||||| ||||||||
Sbjct 1383148 TTCTGGATGTTGTAGTCGCTCAGAGTTCGGCCATCTTCAAGTTGCTTGCCGGCGAAGATC 1383089
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| || || ||||| || || | ||||||||||| |||||||| || ||||| |||
Sbjct 1383088 AATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 1383029
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || || ||||| || ||||| ||||| |||||||| ||||| || ||
Sbjct 1383028 ATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1382970
>seq5
Length=4609732
Score = 100 bits (110), Expect = 7e-16
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| || || || || || || || |||||||| || || | ||| | || || |||
Sbjct 1364994 ACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCGTCCTCC 1365053
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
||||||||||| || ||||| ||||| || ||||| | | | |||||||||||||
Sbjct 1365054 AGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCTAA 1365113
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTC 211082
||||| || | ||| | ||| ||||| ||| |||||||| || |||||||||
Sbjct 1365114 ATCTTGCTCTTGATGTTGTTGATTGTGTC---GCTCGACTCAACCTCCAGCGTGATCGTC 1365170
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| | || || ||||| | || | ||||||
Sbjct 1365171 TTGACAGTAAGTGTCTTCATGAAAATCTGCAT 1365202
Score = 87.8 bits (96), Expect = 4e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 210910 GGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCT 210969
|||| || || || || || |||||||| || || | ||| | ||||| || || |
Sbjct 1365226 GGTGCAGGGTCGAGTCCTTCTGGATGTTGTAGTCGGACCTGGTGCGGCCATCATCGAGTT 1365285
Query 210970 GCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCT 211029
||||||| |||||||| ||||| || || || || |||| || ||||||||||||||||
Sbjct 1365286 GCTTGCCGGCGAAGATCAGGCGCTGCTGTTCGGGCGGAATGCCCTCCTTGTCCTGGATCT 1365345
Query 211030 T 211030
|
Sbjct 1365346 T 1365346
>seq4
Length=6030834
Score = 100 bits (110), Expect = 7e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
||||| ||||||||||| |||| || |||||||| || ||||| | | || || ||
Sbjct 216890 CTTCCCAAGAAGCACGGTCGAGGTGGTCAATCTGCCCTACGTTTCGCCCGTCTCAGAGAG 216949
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAA 139926
|||||| | ||||||||| || ||||||| |||||| || | || || |||| |
Sbjct 216950 GAAAAGCGTCACAACTACGTGCGAAAAGTCGCAGAGCTGGCTGTTCAAAACTTCATCACA 217009
Query 139927 GACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAA 139979
|| ||||| |||| | || ||||| | || ||||||||||| |||||
Sbjct 217010 AACGACAAGGTCAATGTTGCCGGCATTGTCCTTGCTGGTTCCGCAGATTTCAA 217062
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | | ||| ||||| || || || || || |||||||| || || | || ||
Sbjct 3720705 CGAAGACGCAAGACCAGGTGGAGGGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 3720646
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || ||||| || |||||||| |||||||| |||||||| ||||| || |||| |||
Sbjct 3720645 CGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCCGGGGGAATGCCT 3720586
Query 211014 TCCTTGTC 211021
||||||||
Sbjct 3720585 TCCTTGTC 3720578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159147886097105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |