Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 6e-11 >seq2 Length=7068955 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||| | ||| || || ||||| || || || || ||||| || || | || ||| Sbjct 5086200 CGAAATGGCGCCATTGAAATCCGTAGACAGGGCCGAGATCTCCTTCCTCGCGGTCAACGA 5086141 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTT 30132 | ||| |||||| | || |||| || ||||| |||||||||| | | || ||| Sbjct 5086140 ATCCCAACTTGTCGAGGAATTCTCGCGAGCCGTTCCCGTCCCAGATGTGGATGCCTGCTT 5086081 Query 30133 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192 || ||||| || || | ||| | ||| ||||||||||||||||| ||| Sbjct 5086080 CTGAGAGAGGC--TTCGATGTCGTGCAGCCTGATACGAACCACAGCAGCTCGGTGGTGAC 5086023 Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 ||| |||||| | || || ||||||||||||| Sbjct 5086022 GGCTCGTAGAAAGACGCGTTTAGTGGTGAGGAGGGGAA 5085985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406161828818422