Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 147 3e-30 >seq2 Length=7068955 Score = 147 bits (162), Expect = 3e-30 Identities = 618/962 (64%), Gaps = 24/962 (2%) Strand=Plus/Plus Query 77685 GATGCTAGATTACAAACTGCTACCTCATT---AGCGTTGGCATATTGTATTATCTCGGTA 77741 || || ||||| || || || ||||||| ||| || |||| | ||||| || Sbjct 2067207 GAGGCCAGATTGCACACAGCGACCTCATCGGGAGCCGTG---TATTCGACAATCTCAGTG 2067263 Query 77742 CATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAG 77801 || ||||| | | ||| || |||| || | |||||||||||| ||||||| | | Sbjct 2067264 CAAAGATTGGAGCTTCGGATGGTCCCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCG 2067323 Query 77802 TCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAG 77861 ||||| || || ||| | || ||||| ||||| |||||| |||| |||| | ||| Sbjct 2067324 TCCTTGTAGAGCATATAGGGCGTCCCAGTTTCGGTCTGTGCCTCGAGGATAGCATACCAT 2067383 Query 77862 ACGACTCT-AGCTTTTATCATAGATTTGTATC---GCCTCTCTCTTTCATATTGA--GTA 77915 | | ||| ||| |||| || | | | | | ||| | |||||| ||| Sbjct 2067384 A-GTTTCTGAGCCTTTAC---AGTCTGGCGACCACGGCCCTCCTTCTCATATCTCTCGTA 2067439 Query 77916 TATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCAC 77975 || ||| ||| || | | || || | || || | | ||||| |||| || || Sbjct 2067440 TAGAGC-GTTGAACT-CGTCACCATAGACGTCGGCAAGGCCAGGTGCCTCATGAGGACAG 2067497 Query 77976 ATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGA 78035 | | | ||| || | | || || |||| ||| || | ||||| |||| | Sbjct 2067498 AAGAGAGTCCATTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACATG 2067557 Query 78036 GCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGA 78095 || || | || || | |||| ||||| || || |||||| | || | | | Sbjct 2067558 GCGTAGAACAAGTCGCGTGCTCTAACCTCTTCCTTGCCGTGGTTCTTTCTCAGGTTCAAA 2067617 Query 78096 AACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTA 78155 || || | | || | |||||||| || || || || || | | | || || || ||| Sbjct 2067618 AAGTCGAACACGTCTGCGTGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTA 2067677 Query 78156 TTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 78215 || || |||||||| | || | || || ||||| | || | | ||| || |||| Sbjct 2067678 TTGCCACCCTGATCGACGTAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGC 2067737 Query 78216 CCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAA 78273 ||||| || || ||||| || || | ||| || ||| | || ||||| | | | Sbjct 2067738 CCGTTGGAGGTGCCATTGGTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCA 2067797 Query 78274 TGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGT 78333 | || | || || ||||| || |||| || || | || ||| || | || || | Sbjct 2067798 TTGAGA--CCAATACCTCCAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCAT 2067855 Query 78334 AGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGAT 78393 | || ||||| || ||||| || |||||| || | |||||| |||| |||| | | Sbjct 2067856 ATATTCCCTCGATGCTGTCTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTT 2067915 Query 78394 GAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTA 78453 || ||||| || || || | || || || || || ||||| || || | || | | Sbjct 2067916 GAGGGGTTCCGGCGTTGAAAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGA 2067975 Query 78454 GATTGTATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGC 78512 ||||||| || || || || ||| || || | || ||||| || || || |||||| Sbjct 2067976 GATTGTACGTCTCGATGGCCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGC 2068034 Query 78513 ATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTT 78572 || | ||| || || || | |||| | | ||| || || | || ||||||| | Sbjct 2068035 ATAAGCATGTGTTGGGGCCGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTC 2068094 Query 78573 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAA 78632 |||| || || ||||||||||| | ||| ||||||| ||||| | ||| |||| Sbjct 2068095 TCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAGTCTCGGTCGTAGACAATTGCAGAG 2068154 Query 78633 TT 78634 || Sbjct 2068155 TT 2068156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694666394709280