Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 150 3e-31 >seq2 Length=7068955 Score = 150 bits (166), Expect = 3e-31 Identities = 345/515 (67%), Gaps = 6/515 (1%) Strand=Plus/Plus Query 76709 TGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATA 76768 |||||||| || || || || || | | |||| || || ||||| || |||||||| | Sbjct 2067636 TGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACG 2067695 Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTT 76828 || | ||||| ||||| | || | | ||| || |||| ||||| || || ||||| Sbjct 2067696 TAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTG 2067755 Query 76829 GTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTC 76886 || || | ||| || ||| |||||||| | | || || | || || |||| Sbjct 2067756 GTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGA--CCAATACCTC 2067813 Query 76887 CTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTAT 76946 | || | || ||||| | ||||| || | |||||||| || ||||| || || | Sbjct 2067814 CAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGT 2067873 Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 77006 | || |||||| || | |||||| |||| |||| | ||| ||||| || || | Sbjct 2067874 CTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGA 2067933 Query 77007 ACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAA 77066 | | || || || || || || || || || | || | |||||||| || || || Sbjct 2067934 AAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGG 2067993 Query 77067 CTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGT 77125 | ||| ||||| | || ||||| || || || |||||||| | ||| || || || Sbjct 2067994 CCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGC 2068052 Query 77126 CGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 77185 ||||| || | ||| || || | || ||||||| | |||| || || |||||| Sbjct 2068053 CGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCA 2068112 Query 77186 AAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| | ||| ||||||| ||||| | ||| Sbjct 2068113 AAATATTGGTAGTTGAAGTCTCGGTCGTAGACAAT 2068147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931931464640