Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 3e-31
>seq2
Length=7068955
Score = 150 bits (166), Expect = 3e-31
Identities = 345/515 (67%), Gaps = 6/515 (1%)
Strand=Plus/Plus
Query 76709 TGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATA 76768
|||||||| || || || || || | | |||| || || ||||| || |||||||| |
Sbjct 2067636 TGCCATGGCTCGAGGTAGATGGCAAAAGCACCTGGGCGCTTATTGCCACCCTGATCGACG 2067695
Query 76769 TATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTT 76828
|| | ||||| ||||| | || | | ||| || |||| ||||| || || |||||
Sbjct 2067696 TAGCGAGCAGTATTATTGAAGACGCGAAGCATGGGGATAAGCCCGTTGGAGGTGCCATTG 2067755
Query 76829 GTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTC 76886
|| || | ||| || ||| |||||||| | | || || | || || ||||
Sbjct 2067756 GTGCCTGCAATGTAGGATCCTGTGGCACGAATGCAATGGGCATTGAGA--CCAATACCTC 2067813
Query 76887 CTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTAT 76946
| || | || ||||| | ||||| || | |||||||| || ||||| || || |
Sbjct 2067814 CAGCTGTCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCATATATTCCCTCGATGCTGT 2067873
Query 76947 CATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAA 77006
| || |||||| || | |||||| |||| |||| | ||| ||||| || || |
Sbjct 2067874 CTTCTTTCATGTCAATCAAGAAACAGGAGGACAGTTGAGGTTGAGGGGTTCCGGCGTTGA 2067933
Query 77007 ACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAA 77066
| | || || || || || || || || || | || | |||||||| || || ||
Sbjct 2067934 AAAGGGTGGGCGAAGCGTGGGTAAAGCACTTCTGGGACATGAGATTGTACGTCTCGATGG 2067993
Query 77067 CTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGT 77125
| ||| ||||| | || ||||| || || || |||||||| | ||| || || ||
Sbjct 2067994 CCTTTTCAATATCGTCGCTG-TGAATACCCACTGCCACACGCATAAGCATGTGTTGGGGC 2068052
Query 77126 CGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCA 77185
||||| || | ||| || || | || ||||||| | |||| || || ||||||
Sbjct 2068053 CGTTCAGCAACTTGATTGCCAATCTTGAGCAGGTATGATCTCTCCAGCGTCTTGAAACCA 2068112
Query 77186 AAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220
||||| | ||| ||||||| ||||| | |||
Sbjct 2068113 AAATATTGGTAGTTGAAGTCTCGGTCGTAGACAAT 2068147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712931931464640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |