Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02-
23] 277 sequences; 43,029,152 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq7 158 9e-34
seq5 118 8e-22
seq6 96.9 2e-15
>seq7
Length=4110827
Score = 158 bits (174), Expect = 9e-34
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | |||||||| ||||| ||| | |||||||||||| ||||||||||| ||| |
Sbjct 1062897 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 1062956
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| |||| |||| |||||| || || || |||| |||||||| || | |||
Sbjct 1062957 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 1063016
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| |||||| ||| | | | || ||||| | | ||||||
Sbjct 1063017 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACC 1063076
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| |||||||||||| || || || ||||| ||||||||||||||
Sbjct 1063077 TCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123
Score = 138 bits (152), Expect = 8e-28
Identities = 157/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || || ||||| ||||| ||||||||||| || | ||| ||| |||| ||
Sbjct 1063142 CACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 1063201
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || |||||||||| |||||||| || | || | |||||||| |||
Sbjct 1063202 CAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTG 1063261
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || |||||| ||||| ||||||| ||| ||||||||
Sbjct 1063262 GATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTT 1063321
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || || ||||| |||||||||||||||
Sbjct 1063322 GCCAGTAAGTGTCTTTACGAAGATTTGCATG 1063352
Score = 125 bits (138), Expect = 5e-24
Identities = 156/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || || |||||| ||||||||||| |||| || ||| |||| ||
Sbjct 1063371 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCG 1063430
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||| |||||||| || | || | || ||||| |||
Sbjct 1063431 AGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1063490
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| || || ||| | || |||||| ||| || ||||| | ||| || ||||
Sbjct 1063491 ATCTTGGATTTGACATTGT--CGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCT 1063548
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || || || |||||||||||||||||||||
Sbjct 1063549 TGCCAGTAAGTGTCTTCACGAAGATTTGCATG 1063580
>seq5
Length=4609732
Score = 118 bits (130), Expect = 8e-22
Identities = 157/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGT 44186
||| || || ||||| ||||| ||||||||||| |||| | | | ||| |||| |
Sbjct 1364993 CACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGACCTGGT-GCGGCCGTCCT 1365051
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
|||||||||| || |||||||||| |||||||| || || | | |||||||| |||
Sbjct 1365052 CCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCT 1365111
Query 44247 TTATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| ||||| | || |||||| || || ||||||| ||| ||||||
Sbjct 1365112 AAATCTTGCTCTT-GATGTTGTTGATTGTGTCGCTCGACTCAACCTCCAGCGTGATCGTC 1365170
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| | || || ||||||| ||| || ||||||
Sbjct 1365171 TTGACAGTAAGTGTCTTCATGAAAATCTGCATG 1365203
>seq6
Length=4175021
Score = 96.9 bits (106), Expect = 2e-15
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||| ||||||||||| ||| ||||| | || | || || || ||||| ||||| ||
Sbjct 1383150 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCG-GC-CATCTTCAAGTTGCTTGCCGGCGAA 1383093
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|||||| |||||||| || | || | |||||||| || ||||| ||| | |
Sbjct 1383092 GATCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTT 1383033
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||||| || || ||||| | || || ||||| |||||||||||||| ||
Sbjct 1383032 GTCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1382973
Query 44326 GAAG 44329
||||
Sbjct 1382972 GAAG 1382969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989184694909
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