Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20immunda_20[genbank_20GCA_5F000835495.1_202015-02- 23] 277 sequences; 43,029,152 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7 158 9e-34 seq5 118 8e-22 seq6 96.9 2e-15 >seq7 Length=4110827 Score = 158 bits (174), Expect = 9e-34 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | |||||||| ||||| ||| | |||||||||||| ||||||||||| ||| | Sbjct 1062897 CCGCCACGCAGTCTCAGCACCAAGTGCAACGTGCTCTCCTTCTGGATGTTGTAGTCGCTG 1062956 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| |||| |||| |||||| || || || |||| |||||||| || | ||| Sbjct 1062957 AGAGTCCGCCCGTCCTCCAACTGCTTGCCCGCGAAAATCAGCCGCTGCTGGTCCGGAGGA 1063016 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || ||||| ||| |||||| ||| | | | || ||||| | | |||||| Sbjct 1063017 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCTGAGCTCTCCACC 1063076 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| |||||||||||| || || || ||||| |||||||||||||| Sbjct 1063077 TCCAGCGTAATCGTCTTGCCAGTAAGTGTCTTTACGAAGATTTGCAT 1063123 Score = 138 bits (152), Expect = 8e-28 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| || || ||||| ||||| ||||||||||| || | ||| ||| |||| || Sbjct 1063142 CACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 1063201 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || |||||||||| |||||||| || | || | |||||||| ||| Sbjct 1063202 CAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCTTCCTTGTCCTG 1063261 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || |||||| ||||| ||||||| ||| |||||||| Sbjct 1063262 GATCTTGCTCTTGACGTTGTCGATCGTGTCGCTCGATTCAACCTCCAGCGTGATCGTCTT 1063321 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || ||||| ||||||||||||||| Sbjct 1063322 GCCAGTAAGTGTCTTTACGAAGATTTGCATG 1063352 Score = 125 bits (138), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||| ||||||||||| |||| || ||| |||| || Sbjct 1063371 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCG 1063430 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||| |||||||| || | || | || ||||| ||| Sbjct 1063431 AGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1063490 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || || ||| | || |||||| ||| || ||||| | ||| || |||| Sbjct 1063491 ATCTTGGATTTGACATTGT--CGATCGTGTCGCTGGACTCGACCTCAAGCGTGATGGTCT 1063548 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || || ||||||||||||||||||||| Sbjct 1063549 TGCCAGTAAGTGTCTTCACGAAGATTTGCATG 1063580 >seq5 Length=4609732 Score = 118 bits (130), Expect = 8e-22 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGT 44186 ||| || || ||||| ||||| ||||||||||| |||| | | | ||| |||| | Sbjct 1364993 CACGAGATGGAGCGTCGATTCCTTCTGGATGTTGTAGTCGGACCTGGT-GCGGCCGTCCT 1365051 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 |||||||||| || |||||||||| |||||||| || || | | |||||||| ||| Sbjct 1365052 CCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGATGTGATCCCTTCCTTGTCCT 1365111 Query 44247 TTATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| ||||| | || |||||| || || ||||||| ||| |||||| Sbjct 1365112 AAATCTTGCTCTT-GATGTTGTTGATTGTGTCGCTCGACTCAACCTCCAGCGTGATCGTC 1365170 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | || || ||||||| ||| || |||||| Sbjct 1365171 TTGACAGTAAGTGTCTTCATGAAAATCTGCATG 1365203 >seq6 Length=4175021 Score = 96.9 bits (106), Expect = 2e-15 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||| ||||||||||| ||| ||||| | || | || || || ||||| ||||| || Sbjct 1383150 CCTTCTGGATGTTGTAGTCGCTCAGAGTTCG-GC-CATCTTCAAGTTGCTTGCCGGCGAA 1383093 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| |||||||| || | || | |||||||| || ||||| ||| | | Sbjct 1383092 GATCAATCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCTTGGATCTTGGACTTGACGTT 1383033 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||||| || || ||||| | || || ||||| |||||||||||||| || Sbjct 1383032 GTCGATCGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 1382973 Query 44326 GAAG 44329 |||| Sbjct 1382972 GAAG 1382969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989184694909